PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.F00247.1.p
Common NameLOC105971713, MIMGU_mgv1a018883mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 400aa    MW: 45250.1 Da    PI: 4.7037
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.F00247.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.96.7e-20130179255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       +++GVr+++ +g+W+AeIrdps    r  r +lg+++taeeAa  +++a+ kl+g
  Migut.F00247.1.p 130 KFRGVRQRP-WGKWAAEIRDPS----RrVRLWLGTYDTAEEAAMVYDNAAIKLRG 179
                       89*******.**********84....34*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.108.7E-30129186IPR001471AP2/ERF domain
CDDcd000183.26E-33130186No hitNo description
SuperFamilySSF541712.16E-21130186IPR016177DNA-binding domain
PfamPF008476.4E-13130179IPR001471AP2/ERF domain
PROSITE profilePS5103223.644130187IPR001471AP2/ERF domain
SMARTSM003805.7E-39130193IPR001471AP2/ERF domain
PRINTSPR003674.8E-10131142IPR001471AP2/ERF domain
PRINTSPR003674.8E-10153169IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    Send to blast
MDQSLLWPVK YTEHKRITKK IIKPKHMNPK KQPTESIRKI QETHHQNFNF PKTVRISVTD  60
PDATDSSSDE EEDDHLFRRQ RVKKYIREIR LETAVTPTPN CRNRTVEILH SKPKPMKPVK  120
EAAPAAGPRK FRGVRQRPWG KWAAEIRDPS RRVRLWLGTY DTAEEAAMVY DNAAIKLRGP  180
DALTNFITPP PSAKEASPET NVTSVSGYDS GDESNNLSSP TSVLRYRSSN NHSNEETEQT  240
GLTSQSSHDY TEPDRSGPIR GSAREDEPSG SCDGYFMGSV ENIGPGPVHG VSWEMEECQG  300
ETSMVINDYL PMDIPFLDDF FNFQPKDEPL FDDSPSFFNG LDDFTMCIDD FPPLDLSQQQ  360
RANYFGDIKD SFQELDSLEV EDYFQDLTDF GGVDALLAI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A4e-20129186159ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A6e-20126186162ATERF1
3gcc_A6e-20126186162ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.F00247.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012852036.10.0PREDICTED: ethylene-responsive transcription factor CRF4
TrEMBLA0A022QD470.0A0A022QD47_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA49423126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.14e-58cytokinin response factor 4