PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.F00184.1.p

Common Name

LOC105963278, MIMGU_mgv1a024208mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

Dof

Protein Properties

Length: 310aa MW: 33226.3 Da PI: 8.4389

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.F00184.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.8	1.4e-39	36	97	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 k++ ++cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk+sss Migut.F00184.1.p 36 KDQPVNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTAGGSLRNVPVGGGSRKNKRSSS 97 68999*****************************************************9875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	4.0E-28	29	94	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	3.2E-33	38	94	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.04	40	94	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	42	78	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence Send to blast
MDTAQWPQGI GVVKAVEDNS KSINGGHVEK KPRPDKDQPV NCPRCNSTNT KFCYYNNYSL 60 TQPRYFCKTC RRYWTAGGSL RNVPVGGGSR KNKRSSSSSS SSSSAAAAAA SKKILTDLAP 120 PIFSTQNPKI GNDLNLAYNP TSSYYSNDYV AGLPFGLGNK NFNPRNPNNL DLLKSSSSTT 180 GNFMASFMNI NNNNNNMSVS ADPNPVYSTG FGGGGGVHDY KPSLGFSLDG IDQTGYGNNN 240 NNNNILQNHH HHNANIPSTI LFPFEELKPV SATDEFERQD NDHGGGGGGG QDGEITNGYW 300 NGMLAGGSW*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.F00184.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012843129.1	0.0	PREDICTED: dof zinc finger protein DOF4.6-like
TrEMBL	A0A022RZ49	0.0	A0A022RZ49_ERYGU; Uncharacterized protein
STRING	Migut.F00184.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24060.1	2e-50	Dof family protein

Link Out ? help Back to Top
Phytozome	Migut.F00184.1.p
Entrez Gene	105963278