PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E01822.2.p
Common NameLOC105963587, MIMGU_mgv1a007798mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family TALE
Protein Properties Length: 386aa    MW: 43355.3 Da    PI: 6.3996
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E01822.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox23.69.1e-083323652154
                       HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
          Homeobox  21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                       k +yp++e++++L +++gL+ +q+ +WF N+R +
  Migut.E01822.2.p 332 KWPYPTEEDKARLVEETGLQLKQINNWFINQRKR 365
                       469****************************987 PP
2ELK28.14.5e-10286307122
               ELK   1 ELKhqLlrKYsgyLgsLkqEFs 22 
                       ELKh+L+++Y+++L+++++E++
  Migut.E01822.2.p 286 ELKHELKNGYKEKLVDIREEIL 307
                       9*******************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM012552.8E-18119163IPR005540KNOX1
PfamPF037901.7E-16121162IPR005540KNOX1
SMARTSM012564.0E-30172227IPR005541KNOX2
PfamPF037912.9E-21176226IPR005541KNOX2
PROSITE profilePS512139.865286306IPR005539ELK domain
SMARTSM011880.001286307IPR005539ELK domain
PfamPF037894.1E-6286307IPR005539ELK domain
PROSITE profilePS5007111.742306369IPR001356Homeobox domain
SuperFamilySSF466893.59E-16308372IPR009057Homeodomain-like
SMARTSM003891.5E-11308373IPR001356Homeobox domain
CDDcd000864.25E-12309368No hitNo description
Gene3DG3DSA:1.10.10.604.2E-25313371IPR009057Homeodomain-like
PfamPF059201.0E-17326365IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    Send to blast
MAFPNHLSDE EEIPLQHFSE HHLPLNSSTL LRNTLTDNKP SSTPTWLNPA RHFSSPPDDS  60
NFLNLHTTHP SSSSTPTDQW LLHPPPTDID AMASAISHQS PDLHNHSSFG DVAVNWQTAR  120
YKTQILSHPL YEQLLSAHVA CLRIATPVDQ LSRIDGQLAH SQQVVAKYSA LGHGNLGDDK  180
ELDQFMTHYV LLLCSFKEQL QQHVRVHAME AVMACWEIEQ SLQSLTGVSP GEGTGATMSD  240
EEDDDEQVDS DGHLFDMGGG GHDSMGFGPL ILTDSEKSLM ERVRQELKHE LKNGYKEKLV  300
DIREEILRKR RAGKLPGDTT SVLKAWWQSH SKWPYPTEED KARLVEETGL QLKQINNWFI  360
NQRKRKWHSN SSSSTASKSK RKSGK*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E01822.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012843459.10.0PREDICTED: homeobox protein knotted-1-like 3 isoform X2
SwissprotO041361e-167KNAP3_MALDO; Homeobox protein knotted-1-like 3
TrEMBLA0A022R0P60.0A0A022R0P6_ERYGU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25220.11e-140KNOTTED1-like homeobox gene 3