PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E01527.1.p
Common NameMIMGU_mgv1a024895mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 267aa    MW: 28301.7 Da    PI: 5.38
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E01527.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.5e-1977127155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       + y+GVr ++ +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++++g
  Migut.E01527.1.p  77 PVYRGVRMRS-WGKWVSEIREPRK---KSRIWLGTFATPEMAARAHDVAALSIKG 127
                       68*****998.**********843...6***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.5E-1377127IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.6E-3278136IPR001471AP2/ERF domain
SuperFamilySSF541713.2E-2178136IPR016177DNA-binding domain
PROSITE profilePS5103222.82778135IPR001471AP2/ERF domain
SMARTSM003806.5E-3678141IPR001471AP2/ERF domain
PRINTSPR003673.7E-107990IPR001471AP2/ERF domain
CDDcd000181.05E-3079137No hitNo description
PRINTSPR003673.7E-10101117IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MVAPPETSSA DNDLFSNLLP PSSSSSSSLL IISQTKSLQR AAAAKGQVAP PPESAKKIKR  60
IRESTATATD SNSSRHPVYR GVRMRSWGKW VSEIREPRKK SRIWLGTFAT PEMAARAHDV  120
AALSIKGASA TLNFPELAAV LPRPVSISPR DVQAAASKAA AMEKFDDLPS PSSTTTSSSS  180
PSLSSLVSSV DLSTESEEEL SEIVQLPSLG SYFDSVGLRS DFVYIDNAAV EGWTLDLHPS  240
PPWGGGGGVI DDGGISSCFE TLFWNY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A9e-18761361273Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E01527.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012847041.11e-145PREDICTED: LOW QUALITY PROTEIN: ethylene-responsive transcription factor TINY-like
SwissprotQ9LYD35e-60DREB3_ARATH; Dehydration-responsive element-binding protein 3
TrEMBLA0A022QMV01e-177A0A022QMV0_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21224225
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.19e-50ERF family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Galuschka C,Schindler M,Bülow L,Hehl R
    AthaMap web tools for the analysis and identification of co-regulated genes.
    Nucleic Acids Res., 2007. 35(Database issue): p. D857-62
    [PMID:17148485]