PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E01513.1.p
Common NameLOC105967125, MIMGU_mgv1a000686mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB
Protein Properties Length: 1019aa    MW: 112147 Da    PI: 4.8008
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E01513.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.71.1e-173884148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g WT+eEde+l  av+++ g++Wk+Ia+++   Rt+ qc +rwqk+l
  Migut.E01513.1.p 38 KGQWTAEEDEILRMAVERFKGKNWKKIAECFK-DRTDVQCLHRWQKVL 84
                      799****************************9.************986 PP
2Myb_DNA-binding61.61.6e-1990136148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       +g+W++eEde+ +++v+++G++ W+tI+++++ gR +kqc++rw+++l
  Migut.E01513.1.p  90 KGPWSKEEDEIMIELVERYGPKKWSTISQHLP-GRIGKQCRERWHNHL 136
                       79******************************.*************97 PP
3Myb_DNA-binding482.8e-15142184145
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                       + +WT++E++ l++a++++G++ W+   + ++ gRt++ +k++w+
  Migut.E01513.1.p 142 KEAWTQDEELALIQAHQMYGNK-WAELTKFLP-GRTDNAIKNHWN 184
                       579*******************.*********.***********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129416.9983384IPR017930Myb domain
SMARTSM007176.5E-153786IPR001005SANT/Myb domain
PfamPF002493.2E-153884IPR001005SANT/Myb domain
SuperFamilySSF466894.24E-163994IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.4E-234098IPR009057Homeodomain-like
CDDcd001671.17E-134184No hitNo description
PROSITE profilePS5129432.17985140IPR017930Myb domain
SuperFamilySSF466892.4E-3187183IPR009057Homeodomain-like
SMARTSM007171.4E-1789138IPR001005SANT/Myb domain
PfamPF002499.4E-1890136IPR001005SANT/Myb domain
CDDcd001678.42E-1692136No hitNo description
Gene3DG3DSA:1.10.10.602.2E-2799139IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.6E-21140191IPR009057Homeodomain-like
SMARTSM007171.5E-14141189IPR001005SANT/Myb domain
PROSITE profilePS5129419.461141191IPR017930Myb domain
PfamPF002491.2E-13142185IPR001005SANT/Myb domain
CDDcd001674.76E-11144184No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0032875Biological Processregulation of DNA endoreduplication
GO:0003677Molecular FunctionDNA binding
GO:0003713Molecular Functiontranscription coactivator activity
Sequence ? help Back to Top
Protein Sequence    Length: 1019 aa     Download sequence    Send to blast
MESDKTSQTT ESDGVRNSVP RARPLHGRTS GPTRRSTKGQ WTAEEDEILR MAVERFKGKN  60
WKKIAECFKD RTDVQCLHRW QKVLNPDLVK GPWSKEEDEI MIELVERYGP KKWSTISQHL  120
PGRIGKQCRE RWHNHLNPNI NKEAWTQDEE LALIQAHQMY GNKWAELTKF LPGRTDNAIK  180
NHWNSSVKKK LDMYLASGLL SQFQGLPPVS HPNHSAASSS SKAQQSSEDN TVVKGEAEVE  240
EASECSQGST LAGLSQSTNN NTVAHHTGDC RAIEESSSIP CSEDYRPTYQ EATFAPSEVP  300
CELNDKFLEH DFSVDWGAFA GKDWQLNPNE LPDLSLLDLG QESPGVFLPS ISGQDDHGAV  360
PFRQESSAAL DACTSMVNMV EGTTSDCRMV YPEADNGGCY PSENVNSNIN GPADSLLHNC  420
SNFQITEDGK FASQSCYMPS DMLVNSFAQP QSFPTELQTV EGSFMFNMNP NQYSYSQLNE  480
EEPIPPSSHN DFIYSKDSGC SLRVDNSDEA KESPKKVMAN DFVLAPSSDS QCCSSMDKDI  540
QTVKQNDSGA LFYEPPRFPS LDIPFFSCDL IQSGSEMHQE YSPLGIRQLM MSSMTPFKLW  600
DSPSRGDNSP DAVLKTAAKT FTGTPSILKK RHRDLLSPLS EKRGEKKLEA CLKQGSFSNP  660
TNEFSRLEVM FDELIDEEGQ VLSLSPNKRN FGASCTEKEN ATPCGQAANE SNGSMIVSES  720
KFSSNELNGT VCLNKTNELA VADVRTKGGD NDSIETAKEL SGVLVDHNTN DIIFFSPDRF  780
GIKTDRALGL SARALGNRYA RRFDAASKNG AVLSSAESCF SVLCSPRPCA KKDGTNLVST  840
PLEKKIESSG KGVASESNSI FTETPFKRSL ESPSPWKSPW FINTFVPGPR VDTDITIEDI  900
GYFLSPGDRS YDAIGLMKQL GEQTAGALAD AQDVMGGDTP ETIMMGKSSV NQEEEEKENN  960
NCSPNSPKQH DSSLASNFMT ERRTLDFSEC GTPGKETGKS SSSTSFSSPS SYLLKSCR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h88_C6e-69381916159MYB PROTO-ONCOGENE PROTEIN
1h89_C6e-69381916159MYB PROTO-ONCOGENE PROTEIN
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00505DAPTransfer from AT5G11510Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E01513.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012847156.10.0PREDICTED: myb-related protein 3R-1
TrEMBLA0A022QNT70.0A0A022QNT7_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31072448
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11510.10.0myb domain protein 3r-4