PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.E01297.1.p | ||||||||
Common Name | MIMGU_mgv1a021100mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | ERF | ||||||||
Protein Properties | Length: 232aa MW: 25302.3 Da PI: 4.9778 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.2 | 6.5e-16 | 61 | 108 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+r +++g+Wv+eIr+p++ ++r++lg++ ++e+Aa+a++ a+++l+g Migut.E01297.1.p 61 YRGIR--SRTGKWVSEIREPRK---TTRIWLGTYPSPEMAAAAYDVAALALKG 108 99995..789*********843...5***********************9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 4.5E-25 | 60 | 117 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 4.4E-24 | 60 | 122 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 19.915 | 60 | 116 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.01E-17 | 60 | 118 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 3.8E-9 | 61 | 108 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 3.68E-14 | 61 | 118 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence Send to blast |
MSDSPHDQQP NNMIQQRHRP PSPYSPNSPT HSQSSPPKKI KKTTTSSAAA AAATNGKHPM 60 YRGIRSRTGK WVSEIREPRK TTRIWLGTYP SPEMAAAAYD VAALALKGGD VLLNFPDHVT 120 SFPVPSSPSP QDIRRAAADA AEMMRPAGGD TAADDRKLPR EDTEAAAAAE PPDNIVETII 180 DEFIDEEALF YMPNLLLDMA EGMLVSLPRM AFRPPEDSPE NSEGESLWSY F* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.E01297.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012846373.1 | 1e-169 | PREDICTED: ethylene-responsive transcription factor ERF027 | ||||
Swissprot | Q9FJ90 | 2e-51 | ERF25_ARATH; Ethylene-responsive transcription factor ERF025 | ||||
TrEMBL | A0A022QRD9 | 1e-168 | A0A022QRD9_ERYGU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA553 | 22 | 110 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 6e-41 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.E01297.1.p |
Publications ? help Back to Top | |||
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