PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E00830.1.p
Common NameLOC105950316, MIMGU_mgv1a004195mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family GATA
Protein Properties Length: 541aa    MW: 61119 Da    PI: 5.9222
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E00830.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA49.94.3e-16741135
              GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                      C +Cg+t+TplWR+gp  ++ LCnaCG ++r kg+
  Migut.E00830.1.p  7 CYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGT 41
                      ****************88888***********997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004011.4E-9155IPR000679Zinc finger, GATA-type
SuperFamilySSF577162.23E-11446No hitNo description
CDDcd002027.81E-17655No hitNo description
PROSITE patternPS003440732IPR000679Zinc finger, GATA-type
PROSITE profilePS5011411.2740IPR000679Zinc finger, GATA-type
PfamPF003207.0E-14741IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.102.3E-12741IPR013088Zinc finger, NHR/GATA-type
PfamPF139191.1E-9286381IPR028020ASX homology domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 541 aa     Download sequence    Send to blast
MGKHGPCYHC GVTSTPLWRN GPPEKPVLCN ACGSRWRTKG TLVNYTPLHA RAEPEDLDDY  60
RVKSFSVKNK EEKFLKRKYN NNNNNNNNNN ISITEYPAEY NQNQNHHGFR KVFDEDTSNR  120
SSSGSAISIS NSEQYGNADA SELTGPSQQG VVWERMVPSR KRTCVSRSKP SSVEKLTRDL  180
FTILHEQQSS CLSGCSEEEQ LLLLESDKPM ESVEFGHGSV LIRHPSSILL ANGEEESEAS  240
SLSFDNNKQH TMNSKVTVFP ALIDKIKKPP NPVTEQERIR RGKDQVENLQ IMSHRNSPLC  300
CVDLQEIVNF DKFANHLTKD EQQQLLKYLP PLDTLESSDS RNLLPISQIR SILESPEFKE  360
NLLSFQKLLS DGLFDNSFSS LNTEQDCKLL KKLVLSNFTK SKWIEQYQIF KDSKGKNINE  420
PNALATASSL SLKRPRGEGL QQHHKFLGSK AIMRRSYDEE EEELVADKSS SFFTSSRIIN  480
NNDDDYESCH FGYEEDDMLL DIPSNGSFPQ AEAELLIMPS SSFDGQASTS TTSTYFLNRP  540
*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E00830.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012829120.10.0PREDICTED: GATA transcription factor 27-like isoform X1
TrEMBLA0A022PQY00.0A0A022PQY0_ERYGU; Uncharacterized protein
STRINGMigut.E00830.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA20892462
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.32e-93GATA transcription factor 26