PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.E00808.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | CPP | ||||||||
Protein Properties | Length: 126aa MW: 14007 Da PI: 8.0804 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 45.5 | 1.5e-14 | 59 | 97 | 3 | 41 |
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 ++C+Ck s+Clk+YC+C a+g++C+++C+C +C+N+e Migut.E00808.1.p 59 PRKCKCKESRCLKLYCKCLASGTFCNDSCNCVNCHNNEG 97 589*********************************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM01114 | 7.3E-13 | 57 | 98 | IPR033467 | Tesmin/TSO1-like CXC domain |
PROSITE profile | PS51634 | 15.724 | 58 | 125 | IPR005172 | CRC domain |
Pfam | PF03638 | 1.5E-11 | 60 | 96 | IPR005172 | CRC domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 126 aa Download sequence Send to blast |
MEQREREDFP PKNQPESEAS SLGRNLVRQL DLISNVEQPL PPAAPPVVNE GKYAIPKKPR 60 KCKCKESRCL KLYCKCLASG TFCNDSCNCV NCHNNEGNKA ARDEAVNAIF ERNPELCGRL 120 PLSQF* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Plays a role in development of both male and female reproductive tissues. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.E00808.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012842740.1 | 5e-24 | PREDICTED: protein tesmin/TSO1-like CXC 5 | ||||
Swissprot | Q9SZD1 | 5e-20 | TCX5_ARATH; Protein tesmin/TSO1-like CXC 5 | ||||
TrEMBL | A0A4D9C5L5 | 2e-24 | A0A4D9C5L5_SALSN; Uncharacterized protein | ||||
STRING | Migut.E00808.1.p | 1e-85 | (Erythranthe guttata) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29000.1 | 2e-22 | Tesmin/TSO1-like CXC domain-containing protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.E00808.1.p |