PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E00782.1.p
Common NameLOC105962421, MIMGU_mgv1a005500mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HSF
Protein Properties Length: 482aa    MW: 52522.7 Da    PI: 4.3895
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E00782.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind116.81.3e-36361272102
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       Fl k+y++++d+++++++sws+++nsf+v+d+ efak++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++         weF+++ F +g+k+ll
  Migut.E00782.1.p  36 FLVKTYDMVDDPSTDKIVSWSATNNSFIVWDSAEFAKDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQKHLL 119
                       9********************999*****************************************999.........**************** PP

                       XXXXXXXX CS
      HSF_DNA-bind  95 ekikrkks 102
                       + i r+k 
  Migut.E00782.1.p 120 KGISRRKP 127
                       *****986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.104.4E-4029119IPR011991Winged helix-turn-helix DNA-binding domain
SuperFamilySSF467851.22E-3531125IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004151.7E-6332125IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000563.2E-203659IPR000232Heat shock factor (HSF)-type, DNA-binding
PfamPF004476.1E-3236125IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000563.2E-207486IPR000232Heat shock factor (HSF)-type, DNA-binding
PROSITE patternPS0043407599IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000563.2E-208799IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009408Biological Processresponse to heat
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 482 aa     Download sequence    Send to blast
MESGSTSSSV TNGGGDGGGA APPPAPMPAA NAPPPFLVKT YDMVDDPSTD KIVSWSATNN  60
SFIVWDSAEF AKDLLPKYFK HNNFSSFVRQ LNTYGFRKVD PDRWEFANEG FLRGQKHLLK  120
GISRRKPAHG HPQHQQQPPN IQTSAVGPCV EVGKFGLEEE VERLKRDKNV LMQELVRLRQ  180
QQQATDGQLQ TMVHRLQGME QRQQQMMSFL AKAMNSPGFL AQFMQQPNDN NSGRRISEGS  240
KKRRLKQDDG VSEDVGPTTD GQIVKYQPMI NEAAKAMLRQ IMKLDSTSSS SPSPGLENFG  300
NGSDGFLIGD GSLDCSTAST VTLQEVPLFM PSCSDNQAPP IGGAVAPGTI PPPPPPLPPD  360
SDIIPELSQI NLDMVGNSET QNGIFLDGEI PFEIGGFSPD RDMEWDSSNL LEGLPEVVDP  420
FWEKILGEAE MDSVLTDDIF VDAPEKGEDA KASENEFDKS SERVAELTQQ LGLLSSDADK  480
L*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5d5u_B3e-2941251129Heat shock factor protein 1
5d5v_B3e-2941251129Heat shock factor protein 1
5d5v_D3e-2941251129Heat shock factor protein 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1240245KKRRLK
Functional Description ? help Back to Top
Source Description
UniProtDNA-binding protein that specifically binds heat shock promoter elements (HSE) and activates transcription. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E00782.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012842183.10.0PREDICTED: heat shock factor protein HSF8-like
SwissprotQ401521e-161HSF8_SOLLC; Heat shock factor protein HSF8
TrEMBLA0A022R1H40.0A0A022R1H4_ERYGU; Uncharacterized protein
STRINGMigut.E00782.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA64131931
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32330.11e-117heat shock transcription factor A1D
Publications ? help Back to Top
  1. Zhu B, et al.
    Identification and characterization of a novel heat shock transcription factor gene, GmHsfA1, in soybeans (Glycine max).
    J. Plant Res., 2006. 119(3): p. 247-56
    [PMID:16570125]
  2. Cai SY, et al.
    HsfA1a upregulates melatonin biosynthesis to confer cadmium tolerance in tomato plants.
    J. Pineal Res., 2017.
    [PMID:28095626]
  3. Zhou J, et al.
    Heat Shock Factor HsfA1a Is Essential for R Gene-Mediated Nematode Resistance and Triggers H2O2 Production1.
    Plant Physiol., 2018. 176(3): p. 2456-2471
    [PMID:29339397]