PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.E00731.1.p

Common Name

LOC105964685, MIMGU_mgv1a011539mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

Dof

Protein Properties

Length: 279aa MW: 30597 Da PI: 8.6511

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.E00731.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125	2.4e-39	29	89	3	63
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 + +++cprC+stntkfCyynnyslsqPryfCk+CrryWt+GG+lrn+PvGgg+rknk+sss Migut.E00731.1.p 29 KVIINCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSSS 89 45789****************************************************9875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-24	24	80	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.04	32	86	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.3E-33	32	86	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	34	70	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence Send to blast
MDTASAQWPQ DIATCPKQST VERKAQKEKV IINCPRCNST NTKFCYYNNY SLSQPRYFCK 60 TCRRYWTEGG SLRNIPVGGG SRKNKRSSSS SSSSSNSKIK VIPNQDLVIP PQNPNLNKIH 120 DILENNINNQ DLNLGFSMND FKTINEMIRV PSFDIKELQL NPCSSSSSSF PSSVVTSNNS 180 IITDPIITST VNYNSPLGFS SLMMPAGQFK SSDLNFSIDG LGSNYGSFQG AEEQNGKVLF 240 PFEVLKNRDS SNANDANRSD HHAATGYWNG VIGGGGSW*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.E00731.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012844640.1	0.0	PREDICTED: dof zinc finger protein DOF4.6-like isoform X1
TrEMBL	A0A022S1W5	0.0	A0A022S1W5_ERYGU; Uncharacterized protein
STRING	Migut.E00731.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46590.1	1e-36	Dof family protein

Link Out ? help Back to Top
Phytozome	Migut.E00731.1.p
Entrez Gene	105964685