PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E00676.1.p
Common NameLOC105960007, MIMGU_mgv1a010822mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB
Protein Properties Length: 301aa    MW: 32125.4 Da    PI: 7.2191
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E00676.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.12.7e-101155345
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                       W+ e d+++ +a+  ++ +   +W++Ia+ +  g++++++k+++ 
  Migut.E00676.1.p 11 EWSREQDKQFEKAIVTYPEDtsdRWEKIAAQVA-GKSAEDVKHHYE 55
                      7********************************.**********96 PP
2Myb_DNA-binding422.2e-13122166347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT++E+ l++ +  ++G+g+W++I+r +  +Rt+ q+ s+ qky
  Migut.E00676.1.p 122 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKY 166
                       6*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129310.297762IPR017884SANT domain
SMARTSM007172.3E-10860IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.605.9E-5958IPR009057Homeodomain-like
SuperFamilySSF466895.24E-131066IPR009057Homeodomain-like
PfamPF002491.6E-81155IPR001005SANT/Myb domain
CDDcd001674.23E-61758No hitNo description
PROSITE profilePS5129417.581114171IPR017930Myb domain
SuperFamilySSF466891.35E-16117172IPR009057Homeodomain-like
TIGRFAMsTIGR015572.6E-17119169IPR006447Myb domain, plants
SMARTSM007173.2E-10119169IPR001005SANT/Myb domain
PfamPF002492.7E-11122166IPR001005SANT/Myb domain
CDDcd001678.79E-10122167No hitNo description
Gene3DG3DSA:1.10.10.601.4E-10122165IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    Send to blast
MPVEDESSSS EWSREQDKQF EKAIVTYPED TSDRWEKIAA QVAGKSAEDV KHHYELLVDD  60
VNRIESGFIE VPCYNSSSDG SNSHAGDEVT GKKGSNFGHS NGESNHGGKS SRSDQERRKG  120
IAWTEDEHRL FLLGLDKYGK GDWRSISRNF VVTRTPTQVA SHAQKYFIRL NSMNKDRRRS  180
SIHDITSVTG GEISVPQGPI TGQTTTTPPP QNGSSSSAAA IGGSSIKSNK QPVAVAVGPH  240
THQGVSIYGP PSIGQPIGGP LVSAVGTPVY GAPVHGGVVP GAPMNMAPMA YPMPHTSAHR  300
*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cjj_A3e-1512771176RADIALIS
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that coordinates abscisic acid (ABA) biosynthesis and signaling-related genes via binding to the specific promoter motif 5'-(A/T)AACCAT-3'. Represses ABA-mediated salt (e.g. NaCl and KCl) stress tolerance. Regulates leaf shape and promotes vegetative growth. {ECO:0000269|PubMed:26243618}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00500DAPTransfer from AT5G08520Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E00676.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salicylic acid (SA) and gibberellic acid (GA) (PubMed:16463103). Triggered by dehydration and salt stress (PubMed:26243618). {ECO:0000269|PubMed:16463103, ECO:0000269|PubMed:26243618}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012839627.10.0PREDICTED: transcription factor DIVARICATA
SwissprotQ9FNN61e-112SRM1_ARATH; Transcription factor SRM1
TrEMBLA0A022R7A50.0A0A022R7A5_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA41492445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.14e-86MYB family protein
Publications ? help Back to Top
  1. Wang T, et al.
    Salt-Related MYB1 Coordinates Abscisic Acid Biosynthesis and Signaling during Salt Stress in Arabidopsis.
    Plant Physiol., 2015. 169(2): p. 1027-41
    [PMID:26243618]
  2. Chen YS, et al.
    Two MYB-related transcription factors play opposite roles in sugar signaling in Arabidopsis.
    Plant Mol. Biol., 2017. 93(3): p. 299-311
    [PMID:27866313]