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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Migut.E00567.2.p |
| Common Name | LOC105966140, MIMGU_mgv1a011258mg |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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| Family |
BBR-BPC |
| Protein Properties |
Length: 288aa MW: 31907.7 Da PI: 9.9837 |
| Description |
BBR-BPC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Migut.E00567.2.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GAGA_bind | 332.3 | 1.3e-101 | 1 | 287 | 1 | 301 |
GAGA_bind 1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki.....rernlalsekkaavaerd..........maflqrdkalaernkalverd 78
md+d+ rn+gyyep a +k ++gl+lm+s+aerd+k+ r++ + + ++++a+++rd m++ r+ ++++ +
Migut.E00567.2.p 1 MDEDNL--RNWGYYEPPAPMKGQIGLNLMQSMAERDTKPsfltgRDHPV-MVSTNGAFHPRDcvvteppltrMEY-VREDWINH--------R 81
788855..9*********************************9777777.999**********************.77889999........4 PP
GAGA_bind 79 nkllalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkks 171
kl+++ +++ ++ +sg++++ +q++++p+ +++a + +e +p+++++ ++k++++ +++pk++k kk++k +
Migut.E00567.2.p 82 GKLMQIFSNNH-----YNPNLAESSGSHHVP-MQMIQQPEPTEEARP-----VMEDPPVKKEPGTTKKRASAA----SSTPKAPKGKKPRKGP 159
55555554333.....223344455666665.555333333333333.....456677777666666555544....7889999999999977 PP
GAGA_bind 172 ekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqga 264
+k++++ +++ +r+k kk+i++v++gv++D++++P+PvCsCtG+++qCY+WG+GGWqSaCCtttiS+yPLP+stkrrgaRiagrKmSqga
Migut.E00567.2.p 160 AKENSSGNPSV--QRAKPAKKNIEVVIDGVDMDITGIPIPVCSCTGQPQQCYRWGCGGWQSACCTTTISMYPLPMSTKRRGARIAGRKMSQGA 250
66666665555..79****************************************************************************** PP
GAGA_bind 265 fkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
fkk+LekLa+eGy ++np+DLk++WAkHGtnkfv ir
Migut.E00567.2.p 251 FKKVLEKLAGEGYIFANPIDLKSFWAKHGTNKFVVIR 287
***********************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0050793 | Biological Process | regulation of developmental process |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 288 aa
Download sequence Send
to blast |
MDEDNLRNWG YYEPPAPMKG QIGLNLMQSM AERDTKPSFL TGRDHPVMVS TNGAFHPRDC 60
VVTEPPLTRM EYVREDWINH RGKLMQIFSN NHYNPNLAES SGSHHVPMQM IQQPEPTEEA 120
RPVMEDPPVK KEPGTTKKRA SAASSTPKAP KGKKPRKGPA KENSSGNPSV QRAKPAKKNI 180
EVVIDGVDMD ITGIPIPVCS CTGQPQQCYR WGCGGWQSAC CTTTISMYPL PMSTKRRGAR 240
IAGRKMSQGA FKKVLEKLAG EGYIFANPID LKSFWAKHGT NKFVVIR*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. Negatively regulates the homeotic gene AGL11/STK, which controls ovule primordium identity, by a cooperative binding to purine-rich elements present in the regulatory sequence leading to DNA conformational changes. {ECO:0000269|PubMed:14731261, ECO:0000269|PubMed:15722463}. |
