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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Migut.E00567.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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| Family |
BBR-BPC |
| Protein Properties |
Length: 310aa MW: 34471.8 Da PI: 10.1238 |
| Description |
BBR-BPC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Migut.E00567.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GAGA_bind | 331.9 | 1.7e-101 | 23 | 309 | 1 | 301 |
GAGA_bind 1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki.....rernlalsekkaavaerd..........maflqrdkalaernkalverd 78
md+d+ rn+gyyep a +k ++gl+lm+s+aerd+k+ r++ + + ++++a+++rd m++ r+ ++++ +
Migut.E00567.1.p 23 MDEDNL--RNWGYYEPPAPMKGQIGLNLMQSMAERDTKPsfltgRDHPV-MVSTNGAFHPRDcvvteppltrMEY-VREDWINH--------R 103
788855..9*********************************9777777.999**********************.77889999........4 PP
GAGA_bind 79 nkllalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkks 171
kl+++ +++ ++ +sg++++ +q++++p+ +++a + +e +p+++++ ++k++++ +++pk++k kk++k +
Migut.E00567.1.p 104 GKLMQIFSNNH-----YNPNLAESSGSHHVP-MQMIQQPEPTEEARP-----VMEDPPVKKEPGTTKKRASAA----SSTPKAPKGKKPRKGP 181
55555554333.....223344455666665.555333333333333.....456677777666666555544....7889999999999977 PP
GAGA_bind 172 ekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqga 264
+k++++ +++ +r+k kk+i++v++gv++D++++P+PvCsCtG+++qCY+WG+GGWqSaCCtttiS+yPLP+stkrrgaRiagrKmSqga
Migut.E00567.1.p 182 AKENSSGNPSV--QRAKPAKKNIEVVIDGVDMDITGIPIPVCSCTGQPQQCYRWGCGGWQSACCTTTISMYPLPMSTKRRGARIAGRKMSQGA 272
66666665555..79****************************************************************************** PP
GAGA_bind 265 fkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
fkk+LekLa+eGy ++np+DLk++WAkHGtnkfv ir
Migut.E00567.1.p 273 FKKVLEKLAGEGYIFANPIDLKSFWAKHGTNKFVVIR 309
***********************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0050793 | Biological Process | regulation of developmental process |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 310 aa
Download sequence Send
to blast |
MLIFVVFTLS SFVKQSKFVF TIMDEDNLRN WGYYEPPAPM KGQIGLNLMQ SMAERDTKPS 60
FLTGRDHPVM VSTNGAFHPR DCVVTEPPLT RMEYVREDWI NHRGKLMQIF SNNHYNPNLA 120
ESSGSHHVPM QMIQQPEPTE EARPVMEDPP VKKEPGTTKK RASAASSTPK APKGKKPRKG 180
PAKENSSGNP SVQRAKPAKK NIEVVIDGVD MDITGIPIPV CSCTGQPQQC YRWGCGGWQS 240
ACCTTTISMY PLPMSTKRRG ARIAGRKMSQ GAFKKVLEKL AGEGYIFANP IDLKSFWAKH 300
GTNKFVVIR*
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. Negatively regulates the homeotic gene AGL11/STK, which controls ovule primordium identity, by a cooperative binding to purine-rich elements present in the regulatory sequence leading to DNA conformational changes. {ECO:0000269|PubMed:14731261, ECO:0000269|PubMed:15722463}. |
