PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E00498.1.p
Common NameLOC105966213, MIMGU_mgv1a023334mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HSF
Protein Properties Length: 343aa    MW: 39542.3 Da    PI: 4.3745
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E00498.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind117.29.9e-37141052102
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       Fl k ye+++de+++elisw+e+++sfv++de++fa+++LpkyFkhsnf+SFvRQLn+YgFkk+++++         w+F+++sF kg+k+ll
  Migut.E00498.1.p  14 FLVKCYEMVNDESTNELISWTESNDSFVIWDESKFASQLLPKYFKHSNFSSFVRQLNIYGFKKIDTDQ---------WQFANESFVKGQKHLL 97 
                       9****************************************************************999.........**************** PP

                       XXXXXXXX CS
      HSF_DNA-bind  95 ekikrkks 102
                       ++i r+k+
  Migut.E00498.1.p  98 KNITRRKQ 105
                       ******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF467852.1E-359103IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004152.3E-5510103IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene3DG3DSA:1.10.10.102.3E-3711103IPR011991Winged helix-turn-helix DNA-binding domain
PRINTSPR000563.0E-181437IPR000232Heat shock factor (HSF)-type, DNA-binding
PfamPF004472.3E-3114103IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000563.0E-185264IPR000232Heat shock factor (HSF)-type, DNA-binding
PROSITE patternPS0043405377IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000563.0E-186577IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MVKSVENGTS LPPFLVKCYE MVNDESTNEL ISWTESNDSF VIWDESKFAS QLLPKYFKHS  60
NFSSFVRQLN IYGFKKIDTD QWQFANESFV KGQKHLLKNI TRRKQPQIPV HQNNPPQQKD  120
TIAPQQSKQE EERRLALWKE VENLKTDKNA LTQQLMKLSQ HQQNSQSKML LVRKQLQGME  180
KNQQQMLSFI VMAMQSPEFM VQFFQPKENN NNSNRKLSEV TDDCEPSDKM IVPYQPLKDD  240
APEASNLEDF MELDFSLDEM SDFFKDIDFP NDGSVGPSGN DEGRLVLPDI SENDVMLEEL  300
LSSNPSTEIE EFAELDDDEI DNAFDKVEVI TKKMGSLASE IR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5d5u_B4e-25910324129Heat shock factor protein 1
5d5v_B4e-25910324129Heat shock factor protein 1
5d5v_D4e-25910324129Heat shock factor protein 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E00498.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012846233.10.0PREDICTED: heat stress transcription factor A-8
TrEMBLA0A022QS840.0A0A022QS84_ERYGU; Uncharacterized protein
STRINGMigut.E00498.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA122352222
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67970.11e-73heat shock transcription factor A8