PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.E00254.1.p | ||||||||
Common Name | MIMGU_mgv1a013120mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | bHLH | ||||||||
Protein Properties | Length: 231aa MW: 26025.4 Da PI: 5.7176 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 46.7 | 5.8e-15 | 46 | 95 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h+ E+rRR++iN++f+ Lr+l+P++ ++K + a+ L ++++Y++ Lq Migut.E00254.1.p 46 RSKHSVTEQRRRSKINERFQVLRKLIPHS----DQKRDTASFLLEVIQYVQFLQ 95 889*************************9....8*******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 4.45E-18 | 42 | 115 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.5E-21 | 43 | 111 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 16.164 | 44 | 94 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.8E-12 | 46 | 95 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 3.47E-13 | 46 | 99 | No hit | No description |
SMART | SM00353 | 5.5E-11 | 50 | 100 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence Send to blast |
MRSGKSNREE EEEEEDDEDS GTQKDANPSN NSTRDGKNSD KANAMRSKHS VTEQRRRSKI 60 NERFQVLRKL IPHSDQKRDT ASFLLEVIQY VQFLQQNVQN YEESYRPSSS EPTKLMPWRN 120 SHLRADPSST LHGKFDRGQH IPIESIDTPS DAQPSNGLNN QEDLIIEGGT IGISGVYSQR 180 LLNSFTQALE STGVDLSQAT ISVQINLGKR ANKDQSTSED LDQSQKRFKT * |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Positive brassinosteroid-signaling protein. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.E00254.1.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Repressed by heat treatment. {ECO:0000269|PubMed:12679534}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006348644.1 | 3e-84 | PREDICTED: transcription factor BIM2-like isoform X2 | ||||
Swissprot | Q9CAA4 | 4e-70 | BIM2_ARATH; Transcription factor BIM2 | ||||
TrEMBL | A0A022Q5T0 | 1e-168 | A0A022Q5T0_ERYGU; Uncharacterized protein | ||||
STRING | Migut.E00254.1.p | 1e-169 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4426 | 23 | 37 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69010.1 | 9e-62 | BES1-interacting Myc-like protein 2 |
Link Out ? help Back to Top | |
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Phytozome | Migut.E00254.1.p |
Publications ? help Back to Top | |||
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