PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E00231.1.p
Common NameLOC105974745, MIMGU_mgv1a017664mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB
Protein Properties Length: 222aa    MW: 25994.4 Da    PI: 6.1635
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E00231.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.71.5e-141461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg+WT eEd++l +++   G  +W++++++ g+ R++k+c++rw +yl
  Migut.E00231.1.p 14 RGPWTMEEDDKLMHYILNNGIQCWRLVPKHAGLMRCGKSCRLRWINYL 61
                      89********************************************97 PP
2Myb_DNA-binding56.27.8e-1867110146
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rg++T+ E++ +++++ +lG++ W++Ia+++g gRt++++k++w++
  Migut.E00231.1.p  67 RGAFTEAEEDMIIELHSRLGNR-WSKIAAHFG-GRTDNEIKNHWNT 110
                       89********************.*********.***********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.0E-24564IPR009057Homeodomain-like
PROSITE profilePS5129416.091961IPR017930Myb domain
SuperFamilySSF466897.86E-2911108IPR009057Homeodomain-like
SMARTSM007175.7E-81363IPR001005SANT/Myb domain
PfamPF002495.0E-131461IPR001005SANT/Myb domain
CDDcd001672.06E-61661No hitNo description
PROSITE profilePS5129426.83162116IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.2E-2665117IPR009057Homeodomain-like
SMARTSM007171.7E-1666114IPR001005SANT/Myb domain
PfamPF002491.9E-1667110IPR001005SANT/Myb domain
CDDcd001672.26E-1169110No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    Send to blast
MGRQPCCEKS GLKRGPWTME EDDKLMHYIL NNGIQCWRLV PKHAGLMRCG KSCRLRWINY  60
LRPDLKRGAF TEAEEDMIIE LHSRLGNRWS KIAAHFGGRT DNEIKNHWNT RIKKRMKLMG  120
LDPLTHKPIL FDQTYKADQD SIITESVEIH QESNLSLPPL EDYLQIQEKA EVSASNDEER  180
NDVTNSIMFR NEDFSVDCYY QSWMDNPFFW DGFTTLTDNF P*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A2e-29121165108B-MYB
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that acts as positive regulator of abscisic acid (ABA) signaling in response to salt stress. Acts as negative regulator ABI1, ABI2 and PP2CA, which are protein phosphatases 2C acting as negative regulator of ABA signaling. Binds to the DNA specific sequence and core element 5'-ACGT-3' found in the promoters of ABI1 and PP2CA to negatively regulate their expression during ABA-dependent salt stress response. {ECO:0000269|PubMed:23660402}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00510DAPTransfer from AT5G14340Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.E00231.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salt stress, drought stress and abscisic acid (ABA). Down-regulated by salicylic acid (SA) methyl jasmonate (JA). {ECO:0000269|PubMed:23660402}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012855345.11e-168PREDICTED: protein ODORANT1-like
SwissprotQ9C7U79e-69MYB20_ARATH; Transcription factor MYB20
TrEMBLA0A022Q4L11e-166A0A022Q4L1_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14340.14e-82myb domain protein 40
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]