PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.D02583.1.p | ||||||||
Common Name | LOC105974155, MIMGU_mgv1a025246mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | ERF | ||||||||
Protein Properties | Length: 275aa MW: 30966.6 Da PI: 6.5037 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.1 | 9.1e-18 | 24 | 74 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++ GVr+++ +g+WvAeI+ + ++ r +lg+f+taeeAa a+++a+ l+g Migut.D02583.1.p 24 TKFVGVRQRP-SGKWVAEIKNTT---QKIRMWLGTFDTAEEAAHAYDEAACLLRG 74 699*******.7******99932...36**********************99987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 4.3E-13 | 24 | 74 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 3.57E-31 | 24 | 81 | No hit | No description |
SuperFamily | SSF54171 | 8.5E-19 | 25 | 82 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 1.5E-33 | 25 | 88 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.6E-27 | 25 | 82 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 19.388 | 25 | 82 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.1E-7 | 26 | 37 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.1E-7 | 48 | 64 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 275 aa Download sequence Send to blast |
MDDLQIHNNP THKPLINRVT HKNTKFVGVR QRPSGKWVAE IKNTTQKIRM WLGTFDTAEE 60 AAHAYDEAAC LLRGSSRRTN FSNGAAPCNP ALSLKIRNLL HQKRTLNNIN KPTPPNPNPN 120 PNPNPNPNNQ ETIIAKSVVS PPISSTSSQC SNVVEAGYPV FAPYKPDLSC FVGGYEVGST 180 HLDHYYCDQP SAYYNQVDFE KMAIQEDGFF DAKREVEVQN ETGFTDFERI KVERQISASL 240 YAMNGVSEYW DNINEYSNDS FWDITTLCHM FCPI* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.D02583.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012854679.1 | 0.0 | PREDICTED: ethylene-responsive transcription factor RAP2-11-like | ||||
TrEMBL | A0A022Q5X2 | 0.0 | A0A022Q5X2_ERYGU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2018 | 22 | 61 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 7e-30 | related to AP2 11 |
Link Out ? help Back to Top | |
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Phytozome | Migut.D02583.1.p |
Entrez Gene | 105974155 |