PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D02554.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 267aa    MW: 30141.4 Da    PI: 6.0288
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D02554.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.28.7e-182474155
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      +++ GVr+++ +g+WvAeI+  +   ++ r +lg+f+taeeAa a+++a+  l+g
  Migut.D02554.1.p 24 TKFVGVRQRP-SGKWVAEIKNTT---QKIRMWLGTFDTAEEAAHAYDEAACLLRG 74
                      699*******.7******99932...36**********************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.1E-132474IPR001471AP2/ERF domain
CDDcd000183.05E-312481No hitNo description
SMARTSM003801.5E-332588IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.5E-272582IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-192582IPR016177DNA-binding domain
PROSITE profilePS5103219.3882582IPR001471AP2/ERF domain
PRINTSPR003671.0E-72637IPR001471AP2/ERF domain
PRINTSPR003671.0E-74864IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000302Biological Processresponse to reactive oxygen species
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009723Biological Processresponse to ethylene
GO:0035865Biological Processcellular response to potassium ion
GO:0048528Biological Processpost-embryonic root development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MDDLQIHNNP THKPLINRVT HKNTKFVGVR QRPSGKWVAE IKNTTQKIRM WLGTFDTAEE  60
AAHAYDEAAC LLRGSSRRTN FSNGAAPCNP ALSLKIRNLL HQKRTLNNIN KSTTPNPSPN  120
PNPCTTNNQE TIMCQDSTSS QSSNVVEAGY PVFAPYKPDL SYFVGGYEVG STHLDHHYCD  180
QASAYYNQVD FEKMSTQEDG FFDAKTEVEV QNETGFTDFE RIKVERQISA SLYAMNGVSE  240
YWDNINEYSN DSFWDVTTLC HMFCPI*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00521DAPTransfer from AT5G19790Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D02554.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012854679.11e-170PREDICTED: ethylene-responsive transcription factor RAP2-11-like
TrEMBLA0A022Q5X21e-168A0A022Q5X2_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA20182261
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.15e-43related to AP2 11