PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.D02503.1.p | ||||||||
Common Name | LOC105955981, MIMGU_mgv1a013479mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | ERF | ||||||||
Protein Properties | Length: 220aa MW: 25058.3 Da PI: 9.6533 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 34.5 | 4.9e-11 | 111 | 152 | 3 | 51 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 +GV+++ +W A I++ +k+++lg+ g+ eeAa+++++a+ Migut.D02503.1.p 111 MRGVYFKN--LKWQAAIKVE-----KKQIHLGTVGSQEEAARLYDRAAF 152 79***966..5********6.....6********************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 7.4E-5 | 110 | 153 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.11E-7 | 110 | 155 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 1.1E-4 | 110 | 167 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 3.6E-6 | 117 | 157 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence Send to blast |
MVSIRKRRLL AMCSGQNSAT APLPRGDFEQ GNAPAPDNCA ENKRPVTIHP LPLNNDIYSP 60 KEETMMEAGS GSSNVSASSP SKEYQIQHFP EVKRRKRHRR KHVENQEPCI MRGVYFKNLK 120 WQAAIKVEKK QIHLGTVGSQ EEAARLYDRA AFMCGREPNF ELSEEEKNEL RKFKWEEFLA 180 ITRSAITNKS KKSQRRSGTG ARRKVEDDDD WESDEILAP* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.D02503.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012835244.1 | 1e-164 | PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X1 | ||||
TrEMBL | A0A022RGT2 | 1e-163 | A0A022RGT2_ERYGU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6246 | 24 | 33 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13040.2 | 9e-48 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.D02503.1.p |
Entrez Gene | 105955981 |