PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D02289.1.p
Common NameMIMGU_mgv1a017830mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 361aa    MW: 39936.3 Da    PI: 4.8636
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D02289.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.65.9e-10179221855
                       HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        E+ RR r+++ + +Lr+l+P+      +K++Ka+i+  A+ Y+++Lq
  Migut.D02289.1.p 179 SEQTRRCRMKDTLYTLRSLVPNI-----TKMDKASIVGDAISYVQNLQ 221
                       69********************7.....7******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.97E-15169235IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.284171220IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.8E-14173236IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.38E-10173223No hitNo description
SMARTSM003533.0E-10177226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.7E-7179221IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    Send to blast
MDEIGIIPFH QYSEIDNFGL IDFMEESNFD HFIDLVRGEN EIMNHDNFSF SSQDYNHDQF  60
DQPSIGGGGG GGGGGGGGGV VCNINDLFPA APPVEYLFDF QHGGGGNSSS YHDFGLQNAA  120
CRQKQAADHD QGQIREEEEE EEDESSANAA ATTTTTTTST TPTKKNGGGK ADRSRTLVSE  180
QTRRCRMKDT LYTLRSLVPN ITKMDKASIV GDAISYVQNL QMQAKKLQSE IFGLESSLKG  240
RLDKHHREVA PNNMNKVTTS FYPIITKKIF KMDVYQVEER GFYVKIVSNK EKGVAASIYK  300
ALESLTSFNV RSSNLASSGE NYVLTFTLHI ADGEMDIDLR NMKLWIASVF LNQGFEFFQT  360
*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D02289.1.p
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012837953.10.0PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR-like
TrEMBLA0A022RBE70.0A0A022RBE7_ERYGU; Uncharacterized protein
STRINGMigut.D02289.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37822340
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.12e-67FER-like regulator of iron uptake