PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.D02176.1.p

Common Name

MIMGU_mgv1a024179mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

Dof

Protein Properties

Length: 288aa MW: 31720 Da PI: 7.8124

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.D02176.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.7	7.2e-40	50	108	4	62
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++lkcprCdstntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk+ s Migut.D02176.1.p 50 DSLKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRPS 108 5689****************************************************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	6.0E-29	34	106	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	6.6E-34	51	106	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.646	52	106	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	54	90	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005730	Cellular Component	nucleolus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence Send to blast
MGMDSSIAQH HHQEMNCSSS SQTLESMLAG GTKSAAQQQE NKKPRPADMD SLKCPRCDST 60 NTKFCYYNNY SLSQPRYFCK SCRRYWTKGG TLRNVPVGGG CRKNKRPSSA SSSCSSASSR 120 QRSQDNNHHH NPIVVGPAAN IPSSNDDLNL AIARLQRQDN TNHDFSIWGN PNMPYHHMHD 180 HSLIRSEFLE TPLNGIPSFQ YENIGIGMGI GMGIGMGNPY EEFNTTTSMA VKDEDENSKV 240 LFGFPWQNGG GNSNTGEFDS GARLSWNGIN NGSSYNNWHG LLNSPLM*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.D02176.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012827756.1	0.0	PREDICTED: dof zinc finger protein DOF3.2
TrEMBL	A0A022PRD1	0.0	A0A022PRD1_ERYGU; Uncharacterized protein (Fragment)
STRING	Migut.D02176.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28510.1	4e-41	Dof family protein

Link Out ? help Back to Top
Phytozome	Migut.D02176.1.p