PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.D02077.1.p

Common Name

MIMGU_mgv1a021527mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

GRAS

Protein Properties

Length: 637aa MW: 72117.5 Da PI: 7.281

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.D02077.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	365.9	5.7e-112	253	629	2	374
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 +lL++cAeavs+ +l++ ++lL++++ ++sp+gd+++Rla++f++AL+ar+++++ ly a+++++ + se l+++++++ +P+ ++s Migut.D02077.1.p 253 SSLLTRCAEAVSNFNLAAGETLLKQIRSHCSPHGDANERLAHCFANALEARMSGTGAALYTAFASRRIQ---ASELLKSYQAYVTSCPFKRMS 342 689*******************************************************999999998...9**************** PP GRAS 95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185 ++ aN+ I + ++ + ++Hi+Df+i +G+QWp+++q L+ Rp+gpp lRiTgv+ p++g +e++e+tg+rL +++++++vpf +n+ +ak+ Migut.D02077.1.p 343 NIFANKSIGKYTKDAAKIHIVDFGILYGFQWPCIIQGLSLRPGGPPVLRITGVDYPQPGfkPAERIEQTGRRLVSYCKRFNVPFLYNA-IAKK 434 ******************************************************999***********************.7* PP GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsles......erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsle 272 ++++++e+L+++++E+l+Vn++++l +++des +rd+vLkl+k+++P+++v+ + ++n++ F++rf eal +ys++fd++e Migut.D02077.1.p 435 WDEVTVEDLKIEKDEMLVVNCMYRLRHVPDESSVGVGganappPRDSVLKLIKRIKPDLFVHGVVNGSYNAPFFATRFREALFHYSSFFDMME 527 ***************************998543323345569********************************************* PP GRAS 273 aklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdr 365 a+lpr++++r+ +Ere++gr+++nvvaceg+er+er et+++W r ++aGF +++l +++k++k +r+ + ++++e+ ++l++gWk+r Migut.D02077.1.p 528 ATLPRDDRDRMLYEREVFGRDVMNVVACEGSERIERPETYKQWTVRNQRAGFVQMHLYREIVKEVKIKIRQDYHTDFMLDEDGDWLLQGWKGR 620 *******************************************************************99888************* PP GRAS 366 pLvsvSaWr 374 ++++S+Wr Migut.D02077.1.p 621 VMYALSCWR 629 ******8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50985	61.297	226	609	IPR005202	Transcription factor GRAS
Pfam	PF03514	2.0E-109	253	629	IPR005202	Transcription factor GRAS

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated

Sequence ? help Back to Top
Protein Sequence Length: 637 aa Download sequence Send to blast
MGTLSRCDSR NGFQFVGHLS DPRFTNNVVV NMPGILSQNQ VVVNDEDAAA PVECDYFNGV 60 YEYLRQMLME EDDLDHRPCM FQDCSALQAA EKYFHDALSD TANSPPPPPP VPFSFSVNKQ 120 TGDADSILSA SDFPSWTLFE SDVVSGAGQR EGRSGKEKTH RSEYSGEDSQ RSGKQLASYE 180 AEDPAEIQKY DKSLLCPKMN PEFYNKTPPR GSDEKSDSDE ESKKQYRKTK EVKRGRPKGS 240 KKNRAVTEVV DLSSLLTRCA EAVSNFNLAA GETLLKQIRS HCSPHGDANE RLAHCFANAL 300 EARMSGTGAA LYTAFASRRI QASELLKSYQ AYVTSCPFKR MSNIFANKSI GKYTKDAAKI 360 HIVDFGILYG FQWPCIIQGL SLRPGGPPVL RITGVDYPQP GFKPAERIEQ TGRRLVSYCK 420 RFNVPFLYNA IAKKWDEVTV EDLKIEKDEM LVVNCMYRLR HVPDESSVGV GGANAPPPRD 480 SVLKLIKRIK PDLFVHGVVN GSYNAPFFAT RFREALFHYS SFFDMMEATL PRDDRDRMLY 540 EREVFGRDVM NVVACEGSER IERPETYKQW TVRNQRAGFV QMHLYREIVK EVKIKIRQDY 600 HTDFMLDEDG DWLLQGWKGR VMYALSCWRP NSQEST*

Sequence ? help Back to Top

Protein Sequence Length: 637 aa Download sequence Send to blast

MGTLSRCDSR NGFQFVGHLS DPRFTNNVVV NMPGILSQNQ VVVNDEDAAA PVECDYFNGV  60
YEYLRQMLME EDDLDHRPCM FQDCSALQAA EKYFHDALSD TANSPPPPPP VPFSFSVNKQ  120
TGDADSILSA SDFPSWTLFE SDVVSGAGQR EGRSGKEKTH RSEYSGEDSQ RSGKQLASYE  180
AEDPAEIQKY DKSLLCPKMN PEFYNKTPPR GSDEKSDSDE ESKKQYRKTK EVKRGRPKGS  240
KKNRAVTEVV DLSSLLTRCA EAVSNFNLAA GETLLKQIRS HCSPHGDANE RLAHCFANAL  300
EARMSGTGAA LYTAFASRRI QASELLKSYQ AYVTSCPFKR MSNIFANKSI GKYTKDAAKI  360
HIVDFGILYG FQWPCIIQGL SLRPGGPPVL RITGVDYPQP GFKPAERIEQ TGRRLVSYCK  420
RFNVPFLYNA IAKKWDEVTV EDLKIEKDEM LVVNCMYRLR HVPDESSVGV GGANAPPPRD  480
SVLKLIKRIK PDLFVHGVVN GSYNAPFFAT RFREALFHYS SFFDMMEATL PRDDRDRMLY  540
EREVFGRDVM NVVACEGSER IERPETYKQW TVRNQRAGFV QMHLYREIVK EVKIKIRQDY  600
HTDFMLDEDG DWLLQGWKGR VMYALSCWRP NSQEST*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5hyz_A	7e-50	252	629	5	375	GRAS family transcription factor containing protein, expressed
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.D02077.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012827860.1	0.0	PREDICTED: scarecrow-like protein 11
TrEMBL	A0A022PXQ1	0.0	A0A022PXQ1_ERYGU; Uncharacterized protein
STRING	Migut.D02077.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA276	24	191

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07530.1	1e-159	SCARECROW-like 14

Link Out ? help Back to Top
Phytozome	Migut.D02077.1.p