PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.D02052.1.p | ||||||||
Common Name | MIMGU_mgv1a002049mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 722aa MW: 79346.5 Da PI: 6.4672 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62.7 | 5.6e-20 | 25 | 80 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 r++ +++t++q++ Le++F+++++p++++r +L+++l+L+ rq+k+WFqNrR+++k Migut.D02052.1.p 25 RKRYHRHTAHQIQSLEAMFKECQHPDEKTRNQLSRELNLNPRQIKFWFQNRRTQMK 80 789999***********************************************998 PP | |||||||
2 | START | 157 | 1.5e-49 | 273 | 450 | 36 | 206 |
EEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE CS START 36 kfeeskvdsgealrasgvvdmvlallveellddkeqWdetla....kaetlevissg......galqlmvaelqalsplvp.RdfvfvRyirq 117 +++ + ++ea+r+sgvv+m lv ++d++ +W e ++ +a t+evissg g+lqlm+ elq+ls lvp R ++f+R+++q Migut.D02052.1.p 273 RLKNPN-VRIEASRDSGVVIMSGLALVGMFMDSN-KWMELFPtivsRARTIEVISSGmmgshsGTLQLMYEELQVLSALVPtRQVYFLRFCQQ 363 333334.49*************************.9*999999999*********************************************** PP .TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 118 lgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlp.hwllrslvksglaegaktwvatlqrqcek 206 +g+w+ivdvS d++ + + ++ a++lpSg+li++++ng+skvtwveh++ +++ p h l+r l++sgla+ga +w++tlqr ce+ Migut.D02052.1.p 364 IDQGTWAIVDVSYDVPHQES---PFSSAHKLPSGCLIQDMPNGYSKVTWVEHWEIEDKAPiHHLYRELIQSGLAFGAERWLSTLQRICER 450 ****************9955...8****************************************************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 9.19E-21 | 8 | 82 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 5.2E-23 | 13 | 84 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50071 | 17.783 | 22 | 82 | IPR001356 | Homeobox domain |
SMART | SM00389 | 6.0E-19 | 23 | 86 | IPR001356 | Homeobox domain |
Pfam | PF00046 | 2.4E-17 | 25 | 80 | IPR001356 | Homeobox domain |
CDD | cd00086 | 3.86E-17 | 32 | 83 | No hit | No description |
PROSITE pattern | PS00027 | 0 | 57 | 80 | IPR017970 | Homeobox, conserved site |
PROSITE profile | PS50848 | 43.201 | 217 | 453 | IPR002913 | START domain |
SuperFamily | SSF55961 | 3.57E-31 | 218 | 451 | No hit | No description |
CDD | cd08875 | 1.24E-110 | 221 | 449 | No hit | No description |
SMART | SM00234 | 1.5E-39 | 226 | 450 | IPR002913 | START domain |
Pfam | PF01852 | 5.3E-41 | 273 | 450 | IPR002913 | START domain |
Gene3D | G3DSA:3.30.530.20 | 4.9E-6 | 288 | 434 | IPR023393 | START-like domain |
SuperFamily | SSF55961 | 3.57E-17 | 472 | 708 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0008289 | Molecular Function | lipid binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 722 aa Download sequence Send to blast |
MDFRGGGGSS GGDHHDGGSD SHRRRKRYHR HTAHQIQSLE AMFKECQHPD EKTRNQLSRE 60 LNLNPRQIKF WFQNRRTQMK AQHERSDNCV LRSENDKIRC ENIAMRQALE NTICPSCGTT 120 SISDDPYFDE QKLRIENAHL KEELDRISGI ASKYIGRPIQ QLPPLQPIHV SSLDLSMSSN 180 NNHNFGGTSL GLDLIHGNNS SGLMTNLPLN VPTAGISDID KSLMADVAAN AMDELIRLLQ 240 GNEPPLWTKP DAVGRETLDL ESYERLFRGS YGRLKNPNVR IEASRDSGVV IMSGLALVGM 300 FMDSNKWMEL FPTIVSRART IEVISSGMMG SHSGTLQLMY EELQVLSALV PTRQVYFLRF 360 CQQIDQGTWA IVDVSYDVPH QESPFSSAHK LPSGCLIQDM PNGYSKVTWV EHWEIEDKAP 420 IHHLYRELIQ SGLAFGAERW LSTLQRICER FACSMVSGNS TRDLGGVIPS AEGKRSMIGL 480 AQRMVNIFCS CINPCNGQQW TTISGQAEYE VRAALHKSTD LGQPNGVILS AAATVWLPIA 540 PQIVFNFFRD ERNRPQWDVM SNQNPVQEIA HIANGSHPGN CISVLRGFNS SQSNTLILQE 600 SCMDSSGSTV VYCPVDLQAV NIAMSGEDTS YIPILPSGFT ISPDGRDAGG GGGDAAASTS 660 NGPSSAAATG SLMTVVFQIL VSNLPNARMT PESVTTVNNL IGNTVRQIKA ALNVCSDDGR 720 V* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor which acts as positive regulator of drought stress tolerance. Can transactivate CIPK3, NCED3 and ERECTA (PubMed:18451323). Transactivates several cell-wall-loosening protein genes by directly binding to HD motifs in their promoters. These target genes play important roles in coordinating cell-wall extensibility with root development and growth (PubMed:24821957). Transactivates CYP74A/AOS, AOC3, OPR3 and 4CLL5/OPCL1 genes by directly binding to HD motifs in their promoters. These target genes are involved in jasmonate (JA) biosynthesis, and JA signaling affects root architecture by activating auxin signaling, which promotes lateral root formation (PubMed:25752924). Acts as negative regulator of trichome branching (PubMed:16778018, PubMed:24824485). Required for the establishment of giant cell identity on the abaxial side of sepals (PubMed:23095885). May regulate cell differentiation and proliferation during root and shoot meristem development (PubMed:25564655). {ECO:0000269|PubMed:16778018, ECO:0000269|PubMed:18451323, ECO:0000269|PubMed:23095885, ECO:0000269|PubMed:24821957, ECO:0000269|PubMed:24824485, ECO:0000269|PubMed:25564655, ECO:0000269|PubMed:25752924}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.D02052.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012829269.1 | 0.0 | PREDICTED: homeobox-leucine zipper protein HDG11-like | ||||
Swissprot | Q9FX31 | 0.0 | HDG11_ARATH; Homeobox-leucine zipper protein HDG11 | ||||
TrEMBL | A0A022PQP1 | 0.0 | A0A022PQP1_ERYGU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2490 | 23 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73360.1 | 0.0 | homeodomain GLABROUS 11 |
Link Out ? help Back to Top | |
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Phytozome | Migut.D02052.1.p |