PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D01884.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family FAR1
Protein Properties Length: 889aa    MW: 101742 Da    PI: 7.5329
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D01884.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR125.73.6e-081321902590
              FAR1  25 ngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +++i +   +C ++gk++++ k+       +++++++C  +l  +k+++g+w+++  + +HnH+l 
  Migut.D01884.1.p 132 STKIDNVFITCERYGKARNTGKT-------NVTKKCQCPFMLSGRKKRNGVWKLSITNGKHNHPLK 190
                       556777778999**999998777.......9*********************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.0E-5133189IPR004330FAR1 DNA binding domain
PfamPF105511.5E-18304399IPR018289MULE transposase domain
PROSITE profilePS509668.036561599IPR007527Zinc finger, SWIM-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 889 aa     Download sequence    Send to blast
MNPNDAFAWE IPEKDLKLVN LGFCFSISEK NEEGRIAVRE DGILENIPVT FTGQIEKPNE  60
IKANGALDKA RKPRKRQRKP VVKKTKVNLE TFEEVDYSEY FMTNEAFSSK EELKEWAKST  120
GREHDMFLIT QSTKIDNVFI TCERYGKARN TGKTNVTKKC QCPFMLSGRK KRNGVWKLSI  180
TNGKHNHPLK IYDYGSSLVS RLTQEQYETT AALLKNNVKP KDILEHLRKE NPGIKTSLRH  240
IYNARTKIKA EAMSGRTLMQ QLMQCIEENK YVKWLRADPS TGQIMDVMFV HRESIELLKL  300
YPYVLQMNST YETNKYKTSL LEIVGATPVG KSFNVAVAFS RNGSEEHYRW AMWNLKSLFD  360
DGVGPGAIVT RREVGLMKAL DCVFPETHHL LCLNHVDENV QLNAAKHMGG KGAGAAFRTG  420
LWKRMVDSQS VPEFEMCYGQ ILQHCKSYGP LLTYIQETWL VHKENFVRAW TDQVMHFGNT  480
TMNIVESVHS SLKSWLCSST DKFDVMWKLV DSQLEGRIDE IFIELDKSSK TESHAVTYPW  540
SFRNLAGVVT HEALKKMDHE HRAGWSRGLW KHQEKCSCSL RSTHGLPCEH EIAEKERDRN  600
IIYSDEIHLF WRTTGVNCLP KIRAKEAAKA RLVGLLDELR LLPQIEQNKI LDELFPYIDP  660
EKEPPAQLPK CPPEENVSTL SSSGSIEETS ASFDLSEFVP AFVVPFVLSW VNNGNCGYRC  720
VAEVVMGSQD HWMEVRKALF TELSDRFEMY TTVYGGGMEG EQHVARMMSS LCHWTDTSAP  780
AERWMNLSDM GLVIATCYNA MVVEISGKQK MTHLPLVSPD GFGRLSCVMA VGYEETPRSF  840
ILLRMCDEFP VPPFNPQWLR YKEQSVSYLE SLFDRRCRMW DLLSAAML*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17078RKPRKRQRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D01884.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012852996.10.0PREDICTED: uncharacterized protein LOC105972579 isoform X1
STRINGMigut.D01884.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1053624
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-08FAR1-related sequence 5