PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D01856.1.p
Common NameLOC105972558, MIMGU_mgv1a010726mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HD-ZIP
Protein Properties Length: 305aa    MW: 34737.2 Da    PI: 4.4456
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D01856.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.56.2e-2088141356
                       --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                       k+++++ eq+e Le+ Fe ++++  e+r +LAk+lgL+ rq+ +WFqNrRa++k
  Migut.D01856.1.p  88 KKRRLSVEQVEFLERSFEADNKLEPERRVQLAKELGLQPRQIAIWFQNRRARWK 141
                       56689************************************************9 PP
2HD-ZIP_I/II118.24.5e-3887177191
       HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                       ekkrrls eqv++LE+sFe+++kLeper+v+la+eLglqprq+a+WFqnrRAR+kt+++E+dye+L++++++lk++ ++L  e+e L++e+
  Migut.D01856.1.p  87 EKKRRLSVEQVEFLERSFEADNKLEPERRVQLAKELGLQPRQIAIWFQNRRARWKTRRVETDYETLHASFKSLKSDYDNLLLENEMLKTEV 177
                       69*************************************************************************************9887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.67E-1977143IPR009057Homeodomain-like
PROSITE profilePS5007117.73483143IPR001356Homeobox domain
SMARTSM003891.7E-1986147IPR001356Homeobox domain
PfamPF000463.7E-1788141IPR001356Homeobox domain
CDDcd000861.20E-1788141No hitNo description
Gene3DG3DSA:1.10.10.608.9E-2090150IPR009057Homeodomain-like
PRINTSPR000314.1E-6114123IPR000047Helix-turn-helix motif
PROSITE patternPS000270118141IPR017970Homeobox, conserved site
PRINTSPR000314.1E-6123139IPR000047Helix-turn-helix motif
PfamPF021831.3E-11145182IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MGKRGMVGGA GRGGGGDDEN QKVKVSSGER PLESVFASAP AKCYLASGSR TMLSFGVNKS  60
GNSLFQSFDQ EENIGGEYLD EYFGQPEKKR RLSVEQVEFL ERSFEADNKL EPERRVQLAK  120
ELGLQPRQIA IWFQNRRARW KTRRVETDYE TLHASFKSLK SDYDNLLLEN EMLKTEVLRL  180
KENGLDNGTE KSNLKFSDTK EISQAIPREA IDDLISEDDE AKVSFKNEEQ SSAKSDSTNE  240
ESPLLTNGVS SFHDFIEPDH SDISQNGEDE LKEEFFQLDY MFPRIEDARY YGFPVEEDHA  300
FDFW*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D01856.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012852975.10.0PREDICTED: homeobox-leucine zipper protein HAT5-like
TrEMBLA0A022Q9Z10.0A0A022Q9Z1_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8252495
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01220.15e-40homeobox protein 20