PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.D01831.1.p | ||||||||
Common Name | LOC105972595, MIMGU_mgv1a012721mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | bHLH | ||||||||
Protein Properties | Length: 243aa MW: 26398.5 Da PI: 6.5154 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 15.1 | 4.1e-05 | 34 | 84 | 1 | 53 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 +r ++erE+ R+++N+ f L l + + + Ka+ L++A++ +k+ Migut.D01831.1.p 34 KRIHKSEREKMKREHLNELFLALANSLELP--DEDNSNGKASLLTEATRLVKE 84 68899************************6..37888***********99887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 3.35E-5 | 31 | 89 | No hit | No description |
PROSITE profile | PS50888 | 10.931 | 33 | 85 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 4.97E-11 | 34 | 113 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 4.0E-8 | 34 | 108 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0010106 | Biological Process | cellular response to iron ion starvation | ||||
GO:0055072 | Biological Process | iron ion homeostasis | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence Send to blast |
MHSDTAPVVT SKMAMETSTS GDHSSKKNKG KVPKRIHKSE REKMKREHLN ELFLALANSL 60 ELPDEDNSNG KASLLTEATR LVKEMLTQID SLKKENAALL SESQYVTVEK NELKDETSTL 120 AAQIGELQTE LKSRVSDSEL DLNVVPPEYH NHGAASHGTT GGWGPLAPAG HPQVQIVSPL 180 QFAALCSNIQ AYSEVDKEQT ESSHISTVSK PHARYPTPAD KWPSQVLENQ PVLGKRGSGN 240 SN* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.D01831.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012853013.1 | 1e-179 | PREDICTED: transcription factor bHLH47-like | ||||
TrEMBL | A0A022Q6U6 | 1e-177 | A0A022Q6U6_ERYGU; Uncharacterized protein | ||||
STRING | Migut.D01831.1.p | 1e-178 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4307 | 19 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47640.3 | 2e-46 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.D01831.1.p |
Entrez Gene | 105972595 |