PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D01611.4.p
Common NameLOC105973494, MIMGU_mgv1a004008mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 550aa    MW: 60337.8 Da    PI: 6.7118
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D01611.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH55.78.6e-18264313255
                       HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       r +h++ E+rRR++iN++f++Lre++P++     +K +Ka+ L ++++YI+ Lq
  Migut.D01611.4.p 264 RSKHSATEQRRRSKINDRFQKLREIIPNS----EQKRDKASFLLEVIDYIQFLQ 313
                       889*************************8....7*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.103.7E-23259336IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.244262312IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.01E-18262340IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.90E-15264316No hitNo description
PfamPF000103.3E-15264313IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.9E-12268318IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006351Biological Processtranscription, DNA-templated
GO:0009742Biological Processbrassinosteroid mediated signaling pathway
GO:1902448Biological Processpositive regulation of shade avoidance
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 550 aa     Download sequence    Send to blast
MELPQPRPIG TEGRKATHDF LSLYSSTPPA HAQQDPAPPQ GGYLKTHDFL QPLEQVGKNV  60
MSKEENKVGM NATERPPLPA PSPPASVEHL LPGGIGTYSI SYFNQRVLKP DGSLFTAQAI  120
NTTANDENSN CSSYTGGGFT LWDESAVKKG KTGKENISAE RHILQEAGVN NVAGGQWTSF  180
LEKPSQSSSN HKTFSSFSSS QPSSSQKNQS FMDMITSAKN DQEEDDDDEE DEFVIKKEPS  240
SHTKGNLSVK IEAKTADQKP NTPRSKHSAT EQRRRSKIND RFQKLREIIP NSEQKRDKAS  300
FLLEVIDYIQ FLQEKVNRCE SSYNVWNHEP SKMMQWQRNC QIAEGLLDPR GANADNNVPA  360
SVSAATKFDE KKACLSPMNA QNLLVDSDNI SSATTFKERS HHRLQPESNK SKAVVQPNIF  420
NFGTSSNTAV SPKQASSLDK TITWPPLPER NRTKDQEPTI ESGTINISSV YSQGLLNTLT  480
QALQSSGLDL SQASISVQID LGKRANDIPH SSTLLAKDDD DDIPGALTRS RAAGAGEEFG  540
HALKRLRTS*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00498DAPTransfer from AT5G08130Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D01611.4.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012853976.10.0PREDICTED: transcription factor BIM1 isoform X1
TrEMBLA0A022Q6P90.0A0A022Q6P9_ERYGU; Uncharacterized protein
STRINGMigut.D01611.1.p0.0(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08130.41e-109bHLH family protein