PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D01451.2.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB
Protein Properties Length: 790aa    MW: 90050.9 Da    PI: 9.4246
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D01451.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.37.5e-0891183147
                       TSSS-HHHHHHHHHHHHHTTTT..............................................-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..............................................tWktIartmgkgRtlkqcksrwqky 47 
                       r +W++eE e lv++vkq   g                                              +W+  a +   gR++ +c+sr++++
  Migut.D01451.2.p  91 REKWSKEESENLVKGVKQQFQGmllqrsvdllseedgscdvsnvdsiigsikdvditpekirlflpkvNWEQLAGMYVPGRSGAECRSRFLNF 183
                       789****************999****************************************************99999***********997 PP
2Myb_DNA-binding29.61.6e-09191235246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       + WT+ Ed+ l+  v+q G  +W  Ia+ +g++Rt+ qc  r+q 
  Migut.D01451.2.p 191 NQWTAMEDKNLLYIVQQKGVSNWIDIAASLGTNRTPFQCLARYQR 235
                       57*****************************************96 PP
3Myb_DNA-binding44.73.2e-14244289248
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                         WT eEd  l  av+ +G  +W  +a+ m  gRt+ qc +rw+k l
  Migut.D01451.2.p 244 REWTNEEDNHLRAAVETYGESNWQDVASVME-GRTGTQCSNRWLKTL 289
                       68*****************************.***********9975 PP
4Myb_DNA-binding57.14e-18297341247
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       g+WT++Ed++l+ av+ +G++tWk++ar+++ gRt  qc++rw + 
  Migut.D01451.2.p 297 GKWTAQEDKRLKVAVTFFGPKTWKKVARYVP-GRTQVQCRERWVNC 341
                       89*****************************.***********986 PP
5Myb_DNA-binding42.71.3e-13350389344
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 
                       +WT+eEd +l++a+ ++    W+++a++++ gRt++qc  r 
  Migut.D01451.2.p 350 KWTEEEDSKLKEAISKHVFC-WSKVASCVP-GRTDNQCLRRC 389
                       8*******************.*********.*******8886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.56286184IPR017877Myb-like domain
SMARTSM007172.6E-490186IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.2E-1093109IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.2E-10157197IPR009057Homeodomain-like
SuperFamilySSF466891.83E-16167234IPR009057Homeodomain-like
PROSITE profilePS500908.838185237IPR017877Myb-like domain
SMARTSM007178.2E-7189239IPR001005SANT/Myb domain
PfamPF002498.0E-8191235IPR001005SANT/Myb domain
CDDcd001671.25E-5193237No hitNo description
Gene3DG3DSA:1.10.10.603.2E-13198243IPR009057Homeodomain-like
SuperFamilySSF466891.86E-20221293IPR009057Homeodomain-like
PROSITE profilePS5129415.581238289IPR017930Myb domain
SMARTSM007171.5E-13242291IPR001005SANT/Myb domain
PfamPF002498.1E-13244288IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.609.2E-17244292IPR009057Homeodomain-like
CDDcd001676.63E-11245289No hitNo description
PROSITE profilePS5129420.864290346IPR017930Myb domain
SMARTSM007176.5E-14295344IPR001005SANT/Myb domain
SuperFamilySSF466892.61E-26295388IPR009057Homeodomain-like
PfamPF002492.5E-15297341IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.605.4E-18297345IPR009057Homeodomain-like
CDDcd001677.23E-11298340No hitNo description
Gene3DG3DSA:1.10.10.602.5E-16346388IPR009057Homeodomain-like
PROSITE profilePS5129411.68347396IPR017930Myb domain
SMARTSM007172.2E-12347395IPR001005SANT/Myb domain
PfamPF002495.1E-12350390IPR001005SANT/Myb domain
CDDcd001671.94E-10350393No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 790 aa     Download sequence    Send to blast
MMQMESRIEE LNKMKERVKI LKDFQVACKK RTGRSLSQKK DARVQLISLP KLRANMKFNE  60
KISAQYKGPP ENMHVANYKE ALKTFAVSVS REKWSKEESE NLVKGVKQQF QGMLLQRSVD  120
LLSEEDGSCD VSNVDSIIGS IKDVDITPEK IRLFLPKVNW EQLAGMYVPG RSGAECRSRF  180
LNFEDPLINH NQWTAMEDKN LLYIVQQKGV SNWIDIAASL GTNRTPFQCL ARYQRSLNAS  240
ILKREWTNEE DNHLRAAVET YGESNWQDVA SVMEGRTGTQ CSNRWLKTLH PTRERCGKWT  300
AQEDKRLKVA VTFFGPKTWK KVARYVPGRT QVQCRERWVN CLDPSLKMAK WTEEEDSKLK  360
EAISKHVFCW SKVASCVPGR TDNQCLRRCK VLFPGEFRRL QAAKKIQKVA LISNFVDRES  420
ERPTLGPNDF RLPETYRITE SEDADPSRRK KRRTRSRQTE THESIEKDAL SGDTCPEEVS  480
RLTNGNVVEN LHGRRMPRKA KSKNSRLMEK NPCSSSYSHR DTMLGEEVMN SRPNDGKSNR  540
KHQQQKKKSR VKSKPVEGDP TTSGAVCEGN ILIEPDHNEN KCTDPTEECL LPTIADPNLQ  600
WVNVGTEPNC DDSTQSKKAK KLQPRRCRGK MLVEEPEATQ AGDATFFEKG KEMEKKKKKK  660
KKKRTDETNN YLTHFPDSID GGVAVLGNSE DSAAASSVRD NIILSEIEKE KENWQLQIGS  720
SIDASVSNQS KKSTREETCS TETVEVEAGS RSNDQDCPNQ AAYFDITPPL QTYFRKKQKV  780
SDNVDKAFP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h88_C2e-301593882155MYB PROTO-ONCOGENE PROTEIN
1h89_C2e-301593882155MYB PROTO-ONCOGENE PROTEIN
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1448454RKKRRTR
2655663KKKKKKKKR
3657663KKKKKKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D01451.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012834046.10.0PREDICTED: uncharacterized protein LOC105954908
TrEMBLA0A022RKE90.0A0A022RKE9_ERYGU; Uncharacterized protein (Fragment)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18100.21e-161myb domain protein 4r1