PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D01451.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB
Protein Properties Length: 976aa    MW: 110525 Da    PI: 7.8938
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D01451.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.91e-07277369147
                       TSSS-HHHHHHHHHHHHHTTTT..............................................-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..............................................tWktIartmgkgRtlkqcksrwqky 47 
                       r +W++eE e lv++vkq   g                                              +W+  a +   gR++ +c+sr++++
  Migut.D01451.1.p 277 REKWSKEESENLVKGVKQQFQGmllqrsvdllseedgscdvsnvdsiigsikdvditpekirlflpkvNWEQLAGMYVPGRSGAECRSRFLNF 369
                       789****************999****************************************************99999***********997 PP
2Myb_DNA-binding29.32e-09377421246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       + WT+ Ed+ l+  v+q G  +W  Ia+ +g++Rt+ qc  r+q 
  Migut.D01451.1.p 377 NQWTAMEDKNLLYIVQQKGVSNWIDIAASLGTNRTPFQCLARYQR 421
                       57*****************************************96 PP
3Myb_DNA-binding44.34.1e-14430475248
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                         WT eEd  l  av+ +G  +W  +a+ m  gRt+ qc +rw+k l
  Migut.D01451.1.p 430 REWTNEEDNHLRAAVETYGESNWQDVASVME-GRTGTQCSNRWLKTL 475
                       68*****************************.***********9975 PP
4Myb_DNA-binding56.85.2e-18483527247
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       g+WT++Ed++l+ av+ +G++tWk++ar+++ gRt  qc++rw + 
  Migut.D01451.1.p 483 GKWTAQEDKRLKVAVTFFGPKTWKKVARYVP-GRTQVQCRERWVNC 527
                       89*****************************.***********986 PP
5Myb_DNA-binding42.31.7e-13536575344
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 
                       +WT+eEd +l++a+ ++    W+++a++++ gRt++qc  r 
  Migut.D01451.1.p 536 KWTEEEDSKLKEAISKHVFC-WSKVASCVP-GRTDNQCLRRC 575
                       8*******************.*********.*******8886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.562272370IPR017877Myb-like domain
SMARTSM007172.6E-4276372IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.604.3E-10279295IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.3E-10343383IPR009057Homeodomain-like
SuperFamilySSF466892.4E-16353420IPR009057Homeodomain-like
PROSITE profilePS500908.838371423IPR017877Myb-like domain
SMARTSM007178.2E-7375425IPR001005SANT/Myb domain
PfamPF002491.0E-7377421IPR001005SANT/Myb domain
CDDcd001678.69E-6379423No hitNo description
Gene3DG3DSA:1.10.10.604.2E-13384429IPR009057Homeodomain-like
SuperFamilySSF466892.42E-20407479IPR009057Homeodomain-like
PROSITE profilePS5129415.581424475IPR017930Myb domain
SMARTSM007171.5E-13428477IPR001005SANT/Myb domain
PfamPF002491.0E-12430474IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.2E-16430478IPR009057Homeodomain-like
CDDcd001673.93E-11431475No hitNo description
PROSITE profilePS5129420.864476532IPR017930Myb domain
SMARTSM007176.5E-14481530IPR001005SANT/Myb domain
SuperFamilySSF466893.46E-26481574IPR009057Homeodomain-like
PfamPF002493.2E-15483527IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.607.0E-18483531IPR009057Homeodomain-like
CDDcd001674.41E-11484526No hitNo description
Gene3DG3DSA:1.10.10.603.2E-16532574IPR009057Homeodomain-like
SMARTSM007172.2E-12533581IPR001005SANT/Myb domain
PROSITE profilePS5129411.68533582IPR017930Myb domain
PfamPF002496.5E-12536576IPR001005SANT/Myb domain
CDDcd001671.12E-10536579No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 976 aa     Download sequence    Send to blast
MSQEFSDTDS DDGFNEDMEA LRRACQIAGK NPADDQIQPP STTGAATAIG VGESTSSESE  60
SDCEGDDDLQ MVRSIQKRFA PSMDTEDEPP TMEPLCTLPA DWSDSDDCGE DYETLRAIQR  120
RFAAYNEDTK DPTEKESEAS HDAHTRQPSD DVAKSPLKNS DFPKSALAFV DAIKKNRSCQ  180
KLIRTKMMQM ESRIEELNKM KERVKILKDF QVACKKRTGR SLSQKKDARV QLISLPKLRA  240
NMKFNEKISA QYKGPPENMH VANYKEALKT FAVSVSREKW SKEESENLVK GVKQQFQGML  300
LQRSVDLLSE EDGSCDVSNV DSIIGSIKDV DITPEKIRLF LPKVNWEQLA GMYVPGRSGA  360
ECRSRFLNFE DPLINHNQWT AMEDKNLLYI VQQKGVSNWI DIAASLGTNR TPFQCLARYQ  420
RSLNASILKR EWTNEEDNHL RAAVETYGES NWQDVASVME GRTGTQCSNR WLKTLHPTRE  480
RCGKWTAQED KRLKVAVTFF GPKTWKKVAR YVPGRTQVQC RERWVNCLDP SLKMAKWTEE  540
EDSKLKEAIS KHVFCWSKVA SCVPGRTDNQ CLRRCKVLFP GEFRRLQAAK KIQKVALISN  600
FVDRESERPT LGPNDFRLPE TYRITESEDA DPSRRKKRRT RSRQTETHES IEKDALSGDT  660
CPEEVSRLTN GNVVENLHGR RMPRKAKSKN SRLMEKNPCS SSYSHRDTML GEEVMNSRPN  720
DGKSNRKHQQ QKKKSRVKSK PVEGDPTTSG AVCEGNILIE PDHNENKCTD PTEECLLPTI  780
ADPNLQWVNV GTEPNCDDST QSKKAKKLQP RRCRGKMLVE EPEATQAGDA TFFEKGKEME  840
KKKKKKKKKR TDETNNYLTH FPDSIDGGVA VLGNSEDSAA ASSVRDNIIL SEIEKEKENW  900
QLQIGSSIDA SVSNQSKKST REETCSTETV EVEAGSRSND QDCPNQAAYF DITPPLQTYF  960
RKKQKVSDNV DKAFP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h88_C3e-303455752155MYB PROTO-ONCOGENE PROTEIN
1h89_C3e-303455752155MYB PROTO-ONCOGENE PROTEIN
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1634640RKKRRTR
2841849KKKKKKKKR
3843849KKKKKKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D01451.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012834046.10.0PREDICTED: uncharacterized protein LOC105954908
TrEMBLA0A022RKE90.0A0A022RKE9_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA108762124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18100.11e-178myb domain protein 4r1