PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.D01221.1.p | ||||||||
Common Name | LOC105972323, MIMGU_mgv1a000426mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | NF-X1 | ||||||||
Protein Properties | Length: 1162aa MW: 125454 Da PI: 8.0887 | ||||||||
Description | NF-X1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-NF-X1 | 19.1 | 2.8e-06 | 341 | 359 | 1 | 19 |
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG+H+C CH GpC+pC+ Migut.D01221.1.p 341 CGRHSCRNVCHVGPCDPCQ 359 ******************6 PP | |||||||
2 | zf-NF-X1 | 19.2 | 2.6e-06 | 559 | 578 | 1 | 20 |
zf-NF-X1 1 CGkHkCqklCHeGpCppCpq 20 CG+H+C++lCH G CppCp+ Migut.D01221.1.p 559 CGQHSCISLCHSGHCPPCPE 578 ******************96 PP | |||||||
3 | zf-NF-X1 | 17.1 | 1.2e-05 | 669 | 684 | 1 | 16 |
zf-NF-X1 1 CGkHkCqklCHeGpCp 16 CG H C+++CH+ pC+ Migut.D01221.1.p 669 CGLHACSRICHPSPCD 684 ***************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57850 | 8.12E-7 | 163 | 234 | No hit | No description |
PROSITE profile | PS50016 | 8.814 | 171 | 232 | IPR019787 | Zinc finger, PHD-finger |
PROSITE profile | PS50089 | 9.45 | 174 | 230 | IPR001841 | Zinc finger, RING-type |
PROSITE pattern | PS01359 | 0 | 174 | 229 | IPR019786 | Zinc finger, PHD-type, conserved site |
CDD | cd06008 | 8.74E-5 | 263 | 324 | No hit | No description |
SMART | SM00438 | 0.025 | 286 | 304 | IPR000967 | Zinc finger, NF-X1-type |
Pfam | PF01422 | 3.5 | 288 | 303 | IPR000967 | Zinc finger, NF-X1-type |
CDD | cd06008 | 1.47E-11 | 331 | 379 | No hit | No description |
Pfam | PF01422 | 2.4E-5 | 341 | 358 | IPR000967 | Zinc finger, NF-X1-type |
SMART | SM00438 | 2.3E-4 | 341 | 360 | IPR000967 | Zinc finger, NF-X1-type |
CDD | cd06008 | 1.33E-6 | 395 | 438 | No hit | No description |
Pfam | PF01422 | 0.2 | 405 | 422 | IPR000967 | Zinc finger, NF-X1-type |
SMART | SM00438 | 0.017 | 405 | 424 | IPR000967 | Zinc finger, NF-X1-type |
CDD | cd06008 | 5.05E-12 | 453 | 501 | No hit | No description |
Pfam | PF01422 | 4.5E-4 | 463 | 481 | IPR000967 | Zinc finger, NF-X1-type |
SMART | SM00438 | 6.7E-4 | 463 | 482 | IPR000967 | Zinc finger, NF-X1-type |
Pfam | PF01422 | 17 | 521 | 532 | IPR000967 | Zinc finger, NF-X1-type |
SMART | SM00438 | 230 | 521 | 555 | IPR000967 | Zinc finger, NF-X1-type |
CDD | cd06008 | 6.05E-9 | 549 | 601 | No hit | No description |
Pfam | PF01422 | 2.3E-4 | 559 | 577 | IPR000967 | Zinc finger, NF-X1-type |
SMART | SM00438 | 0.001 | 559 | 578 | IPR000967 | Zinc finger, NF-X1-type |
CDD | cd06008 | 4.55E-5 | 606 | 654 | No hit | No description |
Pfam | PF01422 | 10 | 616 | 633 | IPR000967 | Zinc finger, NF-X1-type |
SMART | SM00438 | 0.039 | 616 | 634 | IPR000967 | Zinc finger, NF-X1-type |
Pfam | PF01422 | 0.0011 | 669 | 684 | IPR000967 | Zinc finger, NF-X1-type |
SMART | SM00438 | 0.013 | 669 | 701 | IPR000967 | Zinc finger, NF-X1-type |
Pfam | PF01422 | 110 | 703 | 729 | IPR000967 | Zinc finger, NF-X1-type |
SMART | SM00438 | 0.35 | 710 | 731 | IPR000967 | Zinc finger, NF-X1-type |
Gene3D | G3DSA:3.30.70.330 | 6.3E-4 | 956 | 998 | IPR012677 | Nucleotide-binding alpha-beta plait domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009642 | Biological Process | response to light intensity | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:0009697 | Biological Process | salicylic acid biosynthetic process | ||||
GO:0010188 | Biological Process | response to microbial phytotoxin | ||||
GO:0010310 | Biological Process | regulation of hydrogen peroxide metabolic process | ||||
GO:0042742 | Biological Process | defense response to bacterium | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0000166 | Molecular Function | nucleotide binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0005515 | Molecular Function | protein binding | ||||
GO:0008270 | Molecular Function | zinc ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 1162 aa Download sequence Send to blast |
MSFSEQNKPR ESSSQRPRNN NNLRDNRREW VPRGSVPVVS TPVATPVATP VPSPSVDSSS 60 QNANGNVGES VSRSVGPVPH RNKTHVGSRE NPPRYVSQRE THVGSRGNPP RYVSQRENHV 120 GSRGNPPRHV NHREKEKEKG KYNHNEDTKV FKGVNIPQLV QEIQEKLLKG SVECMICYDM 180 VRRSAPIWSC SSCYSIFHLN CIKKWARAPT SIDLLAEKNQ GFNWRCPGCQ HVQLTSAKEI 240 QYVCFCGKRP DPPSDLYLTP HSCGESCGKP LEREVPGGGM TNEDICPHSC VLQCHPGPCP 300 PCKAFAPPRR CPCGKKVIAT RCSDRKSVLT CGQTCDQLLD CGRHSCRNVC HVGPCDPCQV 360 LVNASCFCKK KTESVLCGDM IVKGEIKGED GVFSCNLTCE NQLNCSNHVC HETCHPGPCG 420 ECELLPSKIK TCCCGKTRLN DDRQSCLDPI PTCSEVCSKI LPCGSHSCKD MCHSGVCPPC 480 RVLVTQKCCC GSTSRTVECY RTTREDEKFT CNKPCGRKKS CGRHRCSDRC CPLSDSATSS 540 LVDWDPHQCS MPCEKKLRCG QHSCISLCHS GHCPPCPETI FTDLSCACGR TSIPPPLPCG 600 TLPPSCQYPC SVPQPCGHPS SHSCHLGDCP PCTVPIAKEC VGGHVVLRNI PCGSKDIRCN 660 KLCGKTRRCG LHACSRICHP SPCDSSSSAA SSTSSRASCG QTCGAPRREC RHTCTSLCHP 720 STMCPDVRCE FSVTITCSCG RITATVPCDA GGSTGGYNVD TVLEASVVQK LPVSLQPTEE 780 NGQKTPLGQR KLMCDDECTK VERKKVLADA FGVNPPNLDA LHFGENASVS EVLSDLLRRD 840 PKWVISVEER CRYLVLGRGR GGLTALKLHV FCVMTKEKRD AVRLIAERWK LSINAAGWEP 900 KRFLIVHVTP KSKAPARVLG LKTCTPSNML QPPIFDSLVD MDPRLVVALF DLPRDADVSA 960 LVLRFGGECE LVWLNDKNAL AVFSDPARAA TAMRRLDQGS VYYGAVVAPQ SGGGASSGAV 1020 LGSGGGAWGS GAPSKDAAVS SGVALKGNPW KKVVLKDSSD WSESSWGGAE EWATAANVSD 1080 SKSLPNLKAK EGPIASSSSS SNRWNVLQSG SSSTSAEASS VKVENVPESS SLSGSKMEER 1140 VSNMPGQQGG DVVDDWEKEC D* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Mediates E2-dependent ubiquitination (By similarity). Confers resistance to osmotic stress such as high salinity. Promotes H(2)O(2) production. Negative regulator of some defense-related genes via an salicylic acid (SA)-dependent signaling pathway. Confers susceptibility to the compatible phytopathogen Pseudomonas syringae pv. tomato strain DC3000 (Pst DC3000). Mediates resistance to type A trichothecenes (phytotoxins produced by phytopathogenic fungi). {ECO:0000250, ECO:0000269|PubMed:16905136, ECO:0000269|PubMed:18069941, ECO:0000269|PubMed:19704430}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.D01221.1.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By brassinosteroids, osmotic stress and high salinity. Accumulates in response to SA, ethylene, methyl jasmonate (MeJA), flagellin (e.g. flg22), and type A trichothecenes such as T-2 toxin and diacetoxyscirpenol (DAS), but not in response to type B trichothecenes such as deoxynivalenol (DON). {ECO:0000269|PubMed:16905136, ECO:0000269|PubMed:18069941, ECO:0000269|PubMed:19704430}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012852722.1 | 0.0 | PREDICTED: NF-X1-type zinc finger protein NFXL1 isoform X2 | ||||
Swissprot | Q9SY59 | 0.0 | NFXL1_ARATH; NF-X1-type zinc finger protein NFXL1 | ||||
TrEMBL | A0A022QA75 | 0.0 | A0A022QA75_ERYGU; Uncharacterized protein | ||||
STRING | Migut.D01221.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA9313 | 24 | 28 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10170.1 | 0.0 | NF-X-like 1 |
Link Out ? help Back to Top | |
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Phytozome | Migut.D01221.1.p |
Entrez Gene | 105972323 |