PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.D01147.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | AP2 | ||||||||
Protein Properties | Length: 261aa MW: 29125 Da PI: 4.6192 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.2 | 6.3e-16 | 80 | 131 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + +k+ +lg++ t eeAa a++ a+ +++g Migut.D01147.2.p 80 SKYRGVARHHHNGRWEARIGRVLG---NKYLYLGTYATQEEAATAYDMAAIEYRG 131 89****99**********988422...5*************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 11.93 | 1 | 45 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 0.0013 | 7 | 51 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.45E-9 | 10 | 46 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 1.5E-9 | 11 | 45 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.7E-11 | 80 | 131 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.11E-17 | 80 | 141 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 5.45E-24 | 80 | 141 | No hit | No description |
PROSITE profile | PS51032 | 18.215 | 81 | 139 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.9E-25 | 81 | 145 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.7E-18 | 81 | 140 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0010187 | Biological Process | negative regulation of seed germination | ||||
GO:0040008 | Biological Process | regulation of growth | ||||
GO:0045723 | Biological Process | positive regulation of fatty acid biosynthetic process | ||||
GO:1901959 | Biological Process | positive regulation of cutin biosynthetic process | ||||
GO:1904278 | Biological Process | positive regulation of wax biosynthetic process | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0000976 | Molecular Function | transcription regulatory region sequence-specific DNA binding | ||||
GO:0000981 | Molecular Function | RNA polymerase II transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence Send to blast |
MGFMVGGSYS TAVYLGAYNE EEAAARAYDL AALKYWGQDI ILNFPFTAYE DELKEMEGQS 60 KEEYICSLRR KSSGFSRGVS KYRGVARHHH NGRWEARIGR VLGNKYLYLG TYATQEEAAT 120 AYDMAAIEYR GVNAITNFDL SHYIKWLQPL QNDVDNNTLK NPSQENTKTT GSSSDSTGGT 180 TTTLSALELV LKSSKFKEMM EQTTATCNSS SNPNPDPDPP RSSFPDDIQT SFDFQDSSSF 240 VEEHDIMFGN YDSFVSSMFQ * |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.D01147.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012852610.1 | 0.0 | PREDICTED: AP2-like ethylene-responsive transcription factor At1g79700 | ||||
Swissprot | Q94AN4 | 2e-75 | AP2L1_ARATH; AP2-like ethylene-responsive transcription factor At1g16060 | ||||
TrEMBL | A0A022QBE8 | 0.0 | A0A022QBE8_ERYGU; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G16060.2 | 3e-59 | ARIA-interacting double AP2 domain protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.D01147.2.p |
Publications ? help Back to Top | |||
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