PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D00942.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 592aa    MW: 65127.4 Da    PI: 5.8313
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D00942.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.12.3e-09491539348
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 
                       +WT  E  +lv++v+++G g+W+ I r        Rt  ++k++w+++l
  Migut.D00942.1.p 491 PWTLSEVVKLVEGVAKYGAGRWSEIKRLAFasySYRTSVDLKDKWRNLL 539
                       8****************************99**99************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129416.091484543IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.9E-13486543IPR009057Homeodomain-like
SMARTSM007175.6E-10488541IPR001005SANT/Myb domain
CDDcd116602.99E-19490540No hitNo description
SuperFamilySSF466892.17E-16490544IPR009057Homeodomain-like
PfamPF002492.2E-7491539IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009651Biological Processresponse to salt stress
GO:0046686Biological Processresponse to cadmium ion
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 592 aa     Download sequence    Send to blast
MDTVVDFVGS EKANAEDCTT SNMSADPIVY QLVRVDGNGR LVPATEDEVM AVEDLLEIDK  60
SNDTPDTLFE PCGSNKVQFE GSEGQPKLED LEIGAEKPSM LPDPEMDCGE IDAQHEDRTP  120
SLVPNASDSS VCQSGSAEGC SKLSGGLYEN KTSKSAIGTG LNPDFSLLNG EVHLDSLGVK  180
ELQDTFKATF GRETSVKDKQ WLKRRIIMGL TNSCDFSTTS FVIIDNRVVK KGKEEACKSM  240
DSSVLVDCVV TSLRESHGSP PTCHDNQNEN HSIVDGMKAQ SSTFQDNYES EDANTNQRPT  300
KRVRKPTKRY IEELSEGESQ DSGAKVVSSV KHPSYDQLSG EVCARPVQNS GLDGKCLTRK  360
DSLGAFGIQV PYVSRIRRSR PRENFMALAK FQPSGMDMST KLENSDDKSS EQLDSGSENK  420
IPHNSSSPRW TQNSPITSSE GCKPYTEKKR IQLEKEVKSK NMESSYKTSS DDDVATITTA  480
NGGIRRKHHR PWTLSEVVKL VEGVAKYGAG RWSEIKRLAF ASYSYRTSVD LKDKWRNLLR  540
ASLAELPTGN GMQNSRKQVS VPIPAPILSR VRELADIHSH NDSHNRSVHV T*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D00942.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012830316.10.0PREDICTED: uncharacterized protein LOC105951401 isoform X1
RefseqXP_012830398.10.0PREDICTED: uncharacterized protein LOC105951401 isoform X1
TrEMBLA0A0K1SBL30.0A0A0K1SBL3_REHGL; Telomere repeat-binding factor like-protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA118812023
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72650.13e-95TRF-like 6