PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.D00743.1.p | ||||||||
Common Name | MIMGU_mgv1a004574mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | bHLH | ||||||||
Protein Properties | Length: 462aa MW: 52081.9 Da PI: 8.8869 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30 | 9.4e-10 | 294 | 336 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 Er+RR+ri+ +++ Lr+l+Pk +K++ a++L A +YI +L Migut.D00743.1.p 294 VTERNRRKRIKAGMFALRSLVPKI-----TKMDRAATLGDAADYIVEL 336 57*********************7.....7***************665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF14215 | 7.6E-20 | 39 | 182 | IPR025610 | Transcription factor MYC/MYB N-terminal |
PROSITE profile | PS50888 | 13.567 | 287 | 336 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.03E-13 | 287 | 355 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.61E-8 | 289 | 341 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 2.0E-12 | 290 | 353 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 8.7E-10 | 293 | 342 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.3E-7 | 294 | 336 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 462 aa Download sequence Send to blast |
MHMCIHTKTN QSINQSQKKF KKKMGGDQIA GSEEGFDWLR TLVNNNPWEY CVIWKLGDDP 60 SRFIEWGSCF CSGAEIRVKD EKGLQKKQFS FGECRDYKLI KHPIRTLSCT YLAQLPPVIP 120 LYSGIHGDVV ISKRARWTFH NNPSASDDQP NGTQVLIPVA CGLIELFSTK HVQKDQKIID 180 YICGGFKLCF KQPNMSENPH TNDYLQKCHF LNFVPQPNNN NYSSFEGSST CSSLSNEPKL 240 NSDSVVLTML PQAPPKMKRK KSCTDSALAR VNEKNGAKIA QKPEKGVFKS KNLVTERNRR 300 KRIKAGMFAL RSLVPKITKM DRAATLGDAA DYIVELLETI ENYEDELKAM EEEEYFDKVS 360 FDELKSAEKK KEGPSDQMTP IKVQVEVSQL GTRDFLVKLV CKQKRGGFSR LMEAMDSLGL 420 QVTDSNVTTF NGSVLTVLKV EAKTMEVEPN SLKHLLVQLI S* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.D00743.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012848987.1 | 0.0 | PREDICTED: transcription factor bHLH90 | ||||
TrEMBL | A0A022S1H8 | 0.0 | A0A022S1H8_ERYGU; Uncharacterized protein | ||||
STRING | Migut.D00743.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA9929 | 22 | 27 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10610.1 | 2e-70 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.D00743.1.p |