PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D00504.1.p
Common NameLOC105951523, MIMGU_mgv1a007040mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 423aa    MW: 46875.6 Da    PI: 7.9404
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D00504.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH50.73.1e-16224270455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        hn  ErrRRdriN+++  L+el+P +      K +Ka++L +A+eY+ksLq
  Migut.D00504.1.p 224 VHNLSERRRRDRINEKMKALQELIPRC-----NKSDKASMLDEAIEYMKSLQ 270
                       6*************************8.....6******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.84E-21218287IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088818.139220269IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.67E-17223274No hitNo description
Gene3DG3DSA:4.10.280.105.1E-22224278IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.5E-14224270IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.1E-17226275IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 423 aa     Download sequence    Send to blast
MQEDEMASWL QYPIEDSSFT RDLYADDLFY TAPVTSAAPP QSVAEIRPQP APPRPPPVPP  60
PPQKSGVSPH LHTFGHFSRL PSRPRIEPAS KPLVNTVRES TVVESNETPK AVAAPEFGVS  120
QSRRQVYARN GNAAVRGGLA RLPCEVTVTS SVDGGSRASF SSSAEPSPPN EKAPQSEAAE  180
DRKRKAREDD DNECQSEDFE YEATEAKKQS RGATSTKRSR AAEVHNLSER RRRDRINEKM  240
KALQELIPRC NKSDKASMLD EAIEYMKSLQ MQLQMMSMGC GMVPMMYPGM QQYMPTMLMG  300
MGMNRPMMPY PSMVPGSPMP NPANMGPRFP MPPGFHLPQT PLPDNCSRIQ GSNSNDPTQN  360
SSQPGPHNFV DPYHQFLGHH HQQQQQQQSP LPQNQGGVQL TATKQDTNKE DRNPENKQSG  420
KK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1228233ERRRRD
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D00504.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012830434.10.0PREDICTED: transcription factor PIF1-like
TrEMBLA0A022S2110.0A0A022S211_ERYGU; Uncharacterized protein
STRINGMigut.D00504.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40592341
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20180.13e-37phytochrome interacting factor 3-like 5