PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D00358.1.p
Common NameLOC105952755, MIMGU_mgv1a022145mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HSF
Protein Properties Length: 343aa    MW: 38781.8 Da    PI: 6.132
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D00358.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind106.81.6e-33451372103
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       Fl+k++++++d ++++++sw   g sfvv+d++ f+ ++Lp+yFkh+nf+SFvRQLn+YgF+kv+ ++         weF+++sF kg+k+ll
  Migut.D00358.1.p  45 FLTKTFDMVDDLSTDSVVSWGGGGGSFVVWDPNAFSATLLPRYFKHNNFSSFVRQLNTYGFRKVDPDK---------WEFANESFLKGHKHLL 128
                       9****************************************************************999.........**************** PP

                       XXXXXXXXX CS
      HSF_DNA-bind  95 ekikrkkse 103
                       + i r+ks+
  Migut.D00358.1.p 129 RIITRRKST 137
                       ******986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.103.4E-3738128IPR011991Winged helix-turn-helix DNA-binding domain
SuperFamilySSF467851.29E-3341134IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004155.0E-5741134IPR000232Heat shock factor (HSF)-type, DNA-binding
PfamPF004473.4E-2945134IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000563.9E-194568IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000563.9E-198395IPR000232Heat shock factor (HSF)-type, DNA-binding
PROSITE patternPS00434084108IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000563.9E-1996108IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MFPVKEEYPA GGCSSSSSWQ LLSSRDPPPP PQPMEGLHEM GPPPFLTKTF DMVDDLSTDS  60
VVSWGGGGGS FVVWDPNAFS ATLLPRYFKH NNFSSFVRQL NTYGFRKVDP DKWEFANESF  120
LKGHKHLLRI ITRRKSTTSA SSSSPPIPQS FDPCVELGRF GLETETDSLR RDKQVLVIEL  180
VKLRHQQQTT RAYLKAMELR LQVTEKKQQQ MMSFLAKAMQ NPDFIRQLVL QKEKRRVVEE  240
EGGGGCSKKR GRRAIEGIKS EPLDYELSEL EELALEIQGR GKAKWESGPH HEGIETSYER  300
HDLDEGFWEE LLNEGFDGDE EDVSVLADRL GFLGSKLKNI SK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ldu_A9e-234313918125Heat shock factor protein 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE).
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D00358.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012831792.10.0PREDICTED: heat stress transcription factor A-7a
SwissprotQ9LUH81e-114HFA6B_ARATH; Heat stress transcription factor A-6b
TrEMBLA0A022S2F20.0A0A022S2F2_ERYGU; Uncharacterized protein
STRINGMigut.D00358.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA57224113
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.11e-76heat shock transcription factor A6B