PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D00287.2.p
Common NameMIMGU_mgv1a002681mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 648aa    MW: 70778.6 Da    PI: 6.1479
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D00287.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH438e-14469514454
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       +h  +ErrRR+r+N++f  Lr+l+P       +K++Ka+iL  +++Y+k+L
  Migut.D00287.2.p 469 NHVLAERRRRERLNEKFIALRSLVPFI-----TKMDKASILGDTIDYVKQL 514
                       7999**********************7.....6****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142158.5E-5014193IPR025610Transcription factor MYC/MYB N-terminal
PROSITE profilePS5088817.765465514IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.09E-18466527IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-17469529IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.7E-11469514IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.9E-17471520IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.03E-7479519No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 648 aa     Download sequence    Send to blast
MDVSPPPPAR KSRLQSVLRA AVQTVEWTYS LFWQLSPQQG ILVWREGYYN GAIKTRKTIQ  60
PTEVTTEEAT VHRSHQLREL YESLSATDAG SSQQSRRPSA ALSPEDLTES EWFYLMCVSF  120
SFPPGVGLPG KAYSKRQHIW LTKASDADSK AFSRAILAKT VVCIPLLDGV VELGTTEMVQ  180
EDTGIIRRVK SFFNNNNGGQ DPNPPRPALS EHSTSNPPTS SEPRFPSSPA AAVVPPTHEP  240
TFFEMGSHVA EEGDDDDEVA ETGGIGSLSP AENTVDADGT THSTGHEPMQ VDIIISENII  300
RAGTPDDDCS NDLDSNFHLL AVSPPGISTE NHPGAGGGLD KPGISVQTWQ LKDDPMTSNI  360
IPPHSAGLPS FDLVVQEDTH YSQTVWSILE TQSNRWSKQS SSTTMSSSGA VSAFSRWCRR  420
KNLLVGGGSS QWALKYILFT VPLLHKMSTA CNNIKETTNN PPPDELSANH VLAERRRRER  480
LNEKFIALRS LVPFITKMDK ASILGDTIDY VKQLLKRIQE LEYSNTNNKH RSVAACSGKE  540
KRKMKVVAEG GGSGGGTVAE EVAQVEVSII ESDALVEIQC VQNEGLLLDV MQVLAQFGIH  600
VTTVQSSLSN GIFTAELRAK VKENVNGRKP SIVEVKRSIH QIIILHR*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4rqw_A2e-2471962195Transcription factor MYC3
4rqw_B2e-2471962195Transcription factor MYC3
4rs9_A2e-2471962195Transcription factor MYC3
4yz6_A2e-2471962195Transcription factor MYC3
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1473478ERRRRE
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator involved in the control of flavonoid pigmentation. {ECO:0000269|PubMed:20949001}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D00287.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012832485.10.0PREDICTED: basic helix-loop-helix protein A
SwissprotE3SXU40.0BHLHW_PEA; Basic helix-loop-helix protein A
TrEMBLA0A022S3S40.0A0A022S3S4_ERYGU; Uncharacterized protein
STRINGMigut.D00287.1.p0.0(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09820.19e-82bHLH family protein
Publications ? help Back to Top
  1. Hellens RP, et al.
    Identification of Mendel's white flower character.
    PLoS ONE, 2010. 5(10): p. e13230
    [PMID:20949001]