PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D00173.1.p
Common NameLOC105954302, MIMGU_mgv1a009095mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family CO-like
Protein Properties Length: 354aa    MW: 39708.1 Da    PI: 4.9366
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D00173.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box24.65.4e-08850339
          zf-B_box  3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39
                       r C+ ++e ++ l+C+ ++  lC +C le H+       H++
  Migut.D00173.1.p  8 DRLCDFCNESKALLYCRADSAKLCLKCDLEVHSTnqlfrkHSR 50
                      679******99*********************65677777765 PP
2zf-B_box32.81.5e-105294442
          zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg....Htvvpl 42
                        C+ +++ ++++fC + +  lC++C  e+H++    H+++pl
  Migut.D00173.1.p 52 LLCDSCNSSPASIFCSTESAVLCQNCDWETHNNarsaHDRRPL 94
                      68*****************************99999**99886 PP
3CCT63.28e-22309351143
               CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 
                       R+ a++RYkeK+ktR+++K+irYesRKa+AesR RvKGrF+k 
  Migut.D00173.1.p 309 RDSAISRYKEKKKTRRYDKHIRYESRKARAESRTRVKGRFAKI 351
                       899**************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003369.0E-14653IPR000315B-box-type zinc finger
PROSITE profilePS5011910.751653IPR000315B-box-type zinc finger
PfamPF006432.2E-6850IPR000315B-box-type zinc finger
CDDcd000217.16E-9953No hitNo description
PROSITE profilePS5011911.4054994IPR000315B-box-type zinc finger
PfamPF006431.7E-75294IPR000315B-box-type zinc finger
CDDcd000215.54E-85394No hitNo description
SMARTSM003360.065494IPR000315B-box-type zinc finger
PROSITE profilePS5101714.852309351IPR010402CCT domain
PfamPF062031.2E-16309350IPR010402CCT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    Send to blast
MTEQQQTDRL CDFCNESKAL LYCRADSAKL CLKCDLEVHS TNQLFRKHSR SLLCDSCNSS  60
PASIFCSTES AVLCQNCDWE THNNARSAHD RRPLEGFNGC PSLTELLGYL GLEDLGKKSF  120
DFGGENDGDW LDLLVWETPS IASLDDLIAS NDCADSSPSF QAMGVPPLPK NRNAVCGQHK  180
EEIFCQLRAM AKKDPNFSGS LEDLELQVPG KCEPDLENNT EPISVPSYET NELKWSSFTS  240
GVPDDEGFPS SNFIDSLFDM NHLVPDKDSD FGDGTDIGNG FEEIHHHVPV DSKPFEVPPP  300
ARELNSHERD SAISRYKEKK KTRRYDKHIR YESRKARAES RTRVKGRFAK IDR*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D00173.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012833433.10.0PREDICTED: zinc finger protein CONSTANS-LIKE 13
TrEMBLA0A022S3840.0A0A022S384_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA73622228
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47890.19e-92B-box type zinc finger protein with CCT domain