PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.C01371.1.p

Common Name

LOC105974176, MIMGU_mgv1a021517mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

bHLH

Protein Properties

Length: 335aa MW: 37089.7 Da PI: 4.6817

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.C01371.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.5	1.2e-08	150	195	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h + Er+ R+++++ f L ++lP + kKl+Ka+ Le A +Y+k L+ Migut.C01371.1.p 150 HLMSERKHREHLRQLFISLSKILPGL-----KKLDKASLLEDAANYLKALE 195 8899********************.....9**************985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	14.075	145	194	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	4.84E-13	148	205	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	2.2E-6	149	195	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.2E-10	149	206	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	2.53E-8	150	199	No hit	No description
SMART	SM00353	4.1E-8	151	200	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence Send to blast
MEEYDDLLLD EEILFDLNPI LSEIYSSPLM ISSNTSSSSS EPQTSDDDGC VMKQLITSPI 60 IWESSSASAS APAPAPHMFS FGNNSYFPAA NSDILNSSST STTTPEVVVT NSTHDLSSQI 120 IDFSSSSVAA ANKHDSTTTT TRTPSQAHEH LMSERKHREH LRQLFISLSK ILPGLKKLDK 180 ASLLEDAANY LKALEERVAI LEEEQAKRSS IEASKLTHNC SYNTERRSID DDDDDENNNM 240 LEVPEIKARI SERKVLIKIS CKKEKGLMPL ISCEMEKMHL TLLDMRMMPF GGSAAALDIT 300 LLAETQSEFR GTVKDIVDHL QRVVLKNPPL QQQQ*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.C01371.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012854699.1	0.0	PREDICTED: transcription factor bHLH18-like
TrEMBL	A0A022Q285	0.0	A0A022Q285_ERYGU; Uncharacterized protein
STRING	Migut.C01371.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA8864	16	28

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	3e-33	bHLH family protein

Link Out ? help Back to Top
Phytozome	Migut.C01371.1.p
Entrez Gene	105974176