PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.C00649.1.p
Common NameLOC105965473, MIMGU_mgv1a004183mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family B3
Protein Properties Length: 541aa    MW: 60868.6 Da    PI: 9.2536
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.C00649.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.74.4e-181599999
                      HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                      ++l+s rl +p +f+++ +gk+++  t  l  +sg+ W v+l    ++++ +l +GW +Fv+++ L+ gD +vF++dg+  f  +v++f++
  Migut.C00649.1.p 15 SSLSSERLNIPYNFVKHLEGKTPG--TALLVGPSGNDWYVNL--IHTDNGLFLNDGWADFVRDHFLEHGDAMVFRYDGELHF--TVQIFDQ 99
                      5788999********777999665..8***************..888888**************************996666..9**9997 PP
2B355.78.8e-18233327198
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                       f kv+++ + + s  l lp +fa+eh    +++ +++l++++g++W+v+ i  +k + ++++ +GW  Fv++n+++ gD+++F+l+++ ef  
  Migut.C00649.1.p 233 FTKVMKKFNISGSYTLNLPYQFATEHLP--KCKLKIVLRNLKGETWTVNSIPtTKVQTSHTFCGGWLAFVRDNNIDIGDICIFELVRKVEF-- 321
                       678888888888889***********63..48889***************875666666**************************997777.. PP

                       EEEEE- CS
                B3  93 vvkvfr 98 
                       +v+++r
  Migut.C00649.1.p 322 NVRILR 327
                       888877 PP
3B350.34.3e-16431520597
                       -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                       +++ + + s  l +p +f  eh   +++ +++ l++++g+ W+v+ i + k ++ +++ +GW  Fv++n+++ gD+++F+l+g+ e  ++v++
  Migut.C00649.1.p 431 MKKFNISGSFTLKIPYQFSVEHL--PASRTEILLRNLNGKCWTVNSIPTTKVQAlHTFCGGWMAFVRDNDIQMGDICIFELVGKCE--MRVHI 519
                       5555666778899*****99994..456679***************88888777899************************99444..58888 PP

                       E CS
                B3  97 f 97 
                       +
  Migut.C00649.1.p 520 C 520
                       7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019361.61E-234102IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.2E-226102IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086314.8477100IPR003340B3 DNA binding domain
SMARTSM010192.9E-1213100IPR003340B3 DNA binding domain
CDDcd100171.04E-171498No hitNo description
PfamPF023622.2E-161599IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.107.1E-24226327IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019367.06E-24226328IPR015300DNA-binding pseudobarrel domain
CDDcd100173.54E-20231327No hitNo description
PfamPF023622.5E-15233327IPR003340B3 DNA binding domain
SMARTSM010195.1E-15233329IPR003340B3 DNA binding domain
PROSITE profilePS5086313.606233329IPR003340B3 DNA binding domain
SuperFamilySSF1019367.65E-24422521IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.104.9E-23423520IPR015300DNA-binding pseudobarrel domain
CDDcd100179.72E-20425520No hitNo description
PfamPF023621.4E-13427520IPR003340B3 DNA binding domain
SMARTSM010193.0E-14427523IPR003340B3 DNA binding domain
PROSITE profilePS5086312.774427523IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 541 aa     Download sequence    Send to blast
MWHMRRPHFL LGFDSSLSSE RLNIPYNFVK HLEGKTPGTA LLVGPSGNDW YVNLIHTDNG  60
LFLNDGWADF VRDHFLEHGD AMVFRYDGEL HFTVQIFDQS MCEKEAAFTV ESSQDLSKYD  120
VNVVRKRGRE RSALLDSIIE GVPKRMRTQS GSFRNVHENN LTVVDQNHNW MQQVDCGSNL  180
KSNVTVAVPL TIVPHENTDP SIGNQTTKLD MLLLSASEAE RMAGSFTSSY PNFTKVMKKF  240
NISGSYTLNL PYQFATEHLP KCKLKIVLRN LKGETWTVNS IPTTKVQTSH TFCGGWLAFV  300
RDNNIDIGDI CIFELVRKVE FNVRILRVGK EGTDGHNRGT ANGGRDNSCT TSKKLSRRKS  360
KKKSDNTSVK APPLCTQSTN CIVESEIHKR FGSLDKQGSH AKGCMSMKSV PEEKMAAQYF  420
VSSFPHFVRV MKKFNISGSF TLKIPYQFSV EHLPASRTEI LLRNLNGKCW TVNSIPTTKV  480
QALHTFCGGW MAFVRDNDIQ MGDICIFELV GKCEMRVHIC GIGKKGLNYQ NGTTRNLPMP  540
*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1352362KKLSRRKSKKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.C00649.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012845475.10.0PREDICTED: B3 domain-containing protein Os01g0723500-like
TrEMBLA0A022S1G90.0A0A022S1G9_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA98202126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-20B3 family protein