PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.C00567.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | HSF | ||||||||
Protein Properties | Length: 241aa MW: 26965.6 Da PI: 8.5006 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 25.3 | 3.9e-08 | 25 | 60 | 2 | 37 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHH CS HSF_DNA-bind 2 Flkklyeiledeelkeliswsengnsfvvldeeefa 37 Fl+k+y++++d+++++++sw e+ ++fvv+ + efa Migut.C00567.1.p 25 FLTKTYQLVDDAATDHIVSWGEDRSTFVVWRPWEFA 60 9******************************99985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.10 | 2.0E-10 | 17 | 66 | IPR011991 | Winged helix-turn-helix DNA-binding domain |
SMART | SM00415 | 1.4E-8 | 21 | 78 | IPR000232 | Heat shock factor (HSF)-type, DNA-binding |
SuperFamily | SSF46785 | 1.14E-11 | 22 | 78 | IPR011991 | Winged helix-turn-helix DNA-binding domain |
Pfam | PF00447 | 3.3E-4 | 25 | 55 | IPR000232 | Heat shock factor (HSF)-type, DNA-binding |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence Send to blast |
MGLMVENCEG IFLSLDSHKS MPAPFLTKTY QLVDDAATDH IVSWGEDRST FVVWRPWEFA 60 NDFFKKGEKH LLCEIHRRKT APPQPDHHHS VAGQNNERLR RNNNMLVSEL AHMKKLYTDI 120 IYFVQNHVKP VAAPPFFCNS SPPSSAASAA IINGSSSSSF LPQQQQQGNS FSQNSCTVRR 180 IVEDPPPQNR TKLFGVPLPL SSSSSKKRLH PEYNSSVETT KARLVIDQTH DLGLNLMPPC 240 * |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE). |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.C00567.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011083880.1 | 2e-85 | heat stress transcription factor B-4-like | ||||
Swissprot | Q9C635 | 2e-54 | HSFB4_ARATH; Heat stress transcription factor B-4 | ||||
TrEMBL | A0A022QCV5 | 3e-90 | A0A022QCV5_ERYGU; Uncharacterized protein (Fragment) | ||||
STRING | Migut.C00567.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2721 | 24 | 50 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G46264.1 | 6e-34 | heat shock transcription factor B4 |
Link Out ? help Back to Top | |
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Phytozome | Migut.C00567.1.p |