PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.C00090.1.p | ||||||||
Common Name | MIMGU_mgv1a022368mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | bHLH | ||||||||
Protein Properties | Length: 240aa MW: 27262.7 Da PI: 7.7464 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 48.5 | 1.6e-15 | 71 | 123 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++ +hn+ Er RR++iN+ ++ Lr+llP+ + +s+Kls +++ ++v+YI + q Migut.C00090.1.p 71 KKLNHNASERDRRKKINNLYSSLRSLLPNeD---QSRKLSIPATVSRVVKYIPEIQ 123 6789*************************77...******************8776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 1.23E-16 | 68 | 144 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 14.729 | 70 | 122 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.2E-12 | 71 | 123 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 6.18E-12 | 71 | 127 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 4.0E-13 | 71 | 141 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 5.6E-11 | 76 | 128 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0010106 | Biological Process | cellular response to iron ion starvation | ||||
GO:0055072 | Biological Process | iron ion homeostasis | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence Send to blast |
MLALSPQFCS VGWLLDESIS HDHQQQNMIN YLSTERQDTS EYSIDLHSPN SSSRTNPKIN 60 DGGGDENKTV KKLNHNASER DRRKKINNLY SSLRSLLPNE DQSRKLSIPA TVSRVVKYIP 120 EIQKEVEKLI HKKEMMTTKM TSSSSSSSSF GLKENQIKQN RSNTNSAVTT TPIGEREIVI 180 QMSTKADYQK RVLLISEAVM SLEEEGFLVT NATSFESFDA RIFYTLHIQV YYIYIINEV* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.C00090.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012828055.1 | 1e-122 | PREDICTED: transcription factor ORG2-like | ||||
TrEMBL | A0A022QPF7 | 1e-168 | A0A022QPF7_ERYGU; Uncharacterized protein (Fragment) | ||||
STRING | Migut.C00090.1.p | 1e-176 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2226 | 22 | 56 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56970.1 | 7e-42 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.C00090.1.p |