PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.B01588.1.p
Common NameLOC105963970, MIMGU_mgv1a021269mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 305aa    MW: 33879.1 Da    PI: 7.1786
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.B01588.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.10.0013170192123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       y+C+ C+k F++   L  H  +H
  Migut.B01588.1.p 170 YRCEECNKLFRSYQALGGHRASH 192
                       9***********99999998887 PP
2zf-C2H214.30.00012221243123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       ++Cp C+++Fs+   L  H rtH
  Migut.B01588.1.p 221 HECPFCDRVFSSGQALGGHKRTH 243
                       79*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576675.97E-5431No hitNo description
PfamPF139124.4E-8630IPR007087Zinc finger, C2H2
PROSITE profilePS501579.162729IPR007087Zinc finger, C2H2
SMARTSM003550.13729IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280929IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.596170197IPR007087Zinc finger, C2H2
SuperFamilySSF576671.64E-9170243No hitNo description
SMARTSM003550.031170192IPR015880Zinc finger, C2H2-like
PfamPF139122.1E-11170194IPR007087Zinc finger, C2H2
PROSITE patternPS000280172192IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.603.0E-4219243IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PfamPF139123.7E-11220243IPR007087Zinc finger, C2H2
SMARTSM003550.012221243IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.889221243IPR007087Zinc finger, C2H2
PROSITE patternPS000280223243IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MMMEKRHRCK LCLRSFGNGR ALGGHMRSHM MKFYASNKRE QVKHAFDSVD FDVVHDSYSS  60
SSDDDDEEEE SALLVDHGFG SESDPICRRS NRVRKSRVSD LEDGFFHVDK KLKFGGYCSP  120
EAELSSVSDT TSEEHLAHCL IMLSRDTWQK EEEEEYSGAA VKAKVGRGKY RCEECNKLFR  180
SYQALGGHRA SHKKIKLNTP PPPPPSPPRK VSGSPPEKKV HECPFCDRVF SSGQALGGHK  240
RTHFIGGATP AAAAAAASKQ SPVIREKLKI DLNLPAPVDE EEDDVSQIAV SAVSDEEFVR  300
PIMR*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00416DAPTransfer from AT3G60580Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.B01588.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012843926.10.0PREDICTED: zinc finger protein ZAT1-like
TrEMBLA0A022QTF40.0A0A022QTF4_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10952480
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.12e-42C2H2-like zinc finger protein