PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.B01411.1.p

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

C2H2

Protein Properties

Length: 345aa MW: 37542.7 Da PI: 9.6182

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.B01411.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.9	7.5e-05	302	321	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ Cgk+F +++ L++H+r++ Migut.B01411.1.p 302 CSQCGKPF-NPEKLHSHMRSC 321 ******.********98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF06136	1.4E-5	26	56	IPR010369	Protein of unknown function DUF966

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence Send to blast
MEAAQGGGGG SDGGGGGGGA EVRRLHIVYF LSRKGRIEHP HLVRVHHLSR NGVRLREENQ 60 KASSKEEENN HSHSSETSIY VSTKSCEIEE ESPTSFGSET STLTDDSGKI EKDKHEDPSL 120 EEKTQRSSNF YSALLSKKKK EKKERSSSTK KVTINEKVTS IAEDREGAVT DSSKEPRLSK 180 SKSKGSSNGG SSIFRNLITC GAVETNDSAV VAVNNNKQSN NKKALLNMCS NDLENVYSAE 240 VCKSDRMGGS QRVFGTPNWT QQKWGARKSC DGVKGSGKNK SESKEKTATC AANYKQLNWP 300 NCSQCGKPFN PEKLHSHMRS CEFMKALSKA NAAGKEIKIT ITKD*

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence Send to blast

MEAAQGGGGG SDGGGGGGGA EVRRLHIVYF LSRKGRIEHP HLVRVHHLSR NGVRLREENQ  60
KASSKEEENN HSHSSETSIY VSTKSCEIEE ESPTSFGSET STLTDDSGKI EKDKHEDPSL  120
EEKTQRSSNF YSALLSKKKK EKKERSSSTK KVTINEKVTS IAEDREGAVT DSSKEPRLSK  180
SKSKGSSNGG SSIFRNLITC GAVETNDSAV VAVNNNKQSN NKKALLNMCS NDLENVYSAE  240
VCKSDRMGGS QRVFGTPNWT QQKWGARKSC DGVKGSGKNK SESKEKTATC AANYKQLNWP  300
NCSQCGKPFN PEKLHSHMRS CEFMKALSKA NAAGKEIKIT ITKD*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.B01411.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012849668.1	1e-178	PREDICTED: protein UPSTREAM OF FLC-like
TrEMBL	A0A022QER3	1e-142	A0A022QER3_ERYGU; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA5206	13	15

Link Out ? help Back to Top
Phytozome	Migut.B01411.1.p