PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.B01361.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HD-ZIP
Protein Properties Length: 376aa    MW: 40876.1 Da    PI: 5.7245
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.B01361.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox551.3e-17215269256
                       T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                       rk+ +++keq   Le+ F+++++++ +++  LAk+l+L  rqV vWFqNrRa+ k
  Migut.B01361.1.p 215 RKKLRLSKEQSAFLEDSFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 269
                       788899***********************************************98 PP
2HD-ZIP_I/II127.84.5e-41215304191
       HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                       +kk+rlskeq+++LE+sF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr +l
  Migut.B01361.1.p 215 RKKLRLSKEQSAFLEDSFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELR-SL 304
                       69*************************************************************************************9.55 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.7E-17195269IPR009057Homeodomain-like
SuperFamilySSF466892.65E-18205272IPR009057Homeodomain-like
PROSITE profilePS5007116.876211271IPR001356Homeobox domain
SMARTSM003891.1E-15213275IPR001356Homeobox domain
PfamPF000465.0E-15215269IPR001356Homeobox domain
CDDcd000861.11E-15215272No hitNo description
PROSITE patternPS000270246269IPR017970Homeobox, conserved site
PfamPF021831.5E-10271305IPR003106Leucine zipper, homeobox-associated
SMARTSM003407.6E-23271316IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    Send to blast
MELGLSLGDV SEPYGFLKKN NQQQKPISKK SGTLDFCMDL GLKSPAIVGN QETEKSEDDG  60
DDDGGDEDDG GDESDDDDDV RGGGETTPLK LSLVPFAPPQ ISSHLPWSSD NGSSENGSSG  120
NMGMRPGRIG FDVNRPAAAA EEVSSTNSMG GGGGSPFGHH LGFNMFRNTA TGNHQPRGQK  180
RVLESSAAGS DGAEAERTSS PRATSDDDEN ALNARKKLRL SKEQSAFLED SFKEHNTLNP  240
KQKLALAKQL NLRPRQVEVW FQNRRARTKL KQTEVDCEYL KRCCETLTEE NRRLQKELQE  300
LRSLKTSSNN PFYMQLPATT LTMCPSCERV ASTPTPAAAV DSTAAQKAVP FPVTRPRFYP  360
FSQSPTRHNH QPAAS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1263271RRARTKLKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.B01361.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012849795.10.0PREDICTED: homeobox-leucine zipper protein HOX11-like
TrEMBLA0A022QIN71e-161A0A022QIN7_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29024186
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06710.11e-61homeobox from Arabidopsis thaliana