PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.B00988.1.p
Common NameLOC105958213, MIMGU_mgv1a015972mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family GATA
Protein Properties Length: 140aa    MW: 15776.4 Da    PI: 10.4608
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.B00988.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.71.8e-193265134
              GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
                      Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk++
  Migut.B00988.1.p 32 CSDCKTTKTPLWRSGPSGPKSLCNACGIKHRKRR 65
                      ********************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011413.1912662IPR000679Zinc finger, GATA-type
SMARTSM004013.4E-132678IPR000679Zinc finger, GATA-type
SuperFamilySSF577162.47E-132876No hitNo description
Gene3DG3DSA:3.30.50.101.9E-163066IPR013088Zinc finger, NHR/GATA-type
CDDcd002023.49E-153181No hitNo description
PfamPF003203.2E-173265IPR000679Zinc finger, GATA-type
PROSITE patternPS0034403257IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    Send to blast
MMMMMMMMTE EVMESSQKEE GDLSDTTNKK SCSDCKTTKT PLWRSGPSGP KSLCNACGIK  60
HRKRRPAEGW KNEVKKGKIG KTRKMIKPLG EKVEIENSEE ERSRSMKKKS RRRQSQSQWG  120
EVERAALLLM ALSCGAVFA*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.B00988.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012837670.12e-96PREDICTED: GATA transcription factor 16-like
TrEMBLA0A022RBZ83e-95A0A022RBZ8_ERYGU; Uncharacterized protein
STRINGMigut.B00988.1.p6e-96(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA127501721
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49300.11e-14GATA transcription factor 16