PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.B00825.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | bHLH | ||||||||
Protein Properties | Length: 185aa MW: 21098.2 Da PI: 9.0806 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 32.4 | 1.6e-10 | 2 | 52 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 hn+ Er RR ++N ++ Lrel+P + + ++k+ +i+ k+ eYI +L Migut.B00825.1.p 2 EHNAKERIRRMKLNASYLALRELMPRSRRSSKKRWAAPAIVDKVLEYIPEL 52 6*************************64556566**************988 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 11.884 | 1 | 52 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.6E-7 | 2 | 52 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.96E-10 | 2 | 67 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 3.8E-9 | 2 | 66 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 8.89E-6 | 3 | 57 | No hit | No description |
SMART | SM00353 | 4.4E-5 | 4 | 58 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence Send to blast |
MEHNAKERIR RMKLNASYLA LRELMPRSRR SSKKRWAAPA IVDKVLEYIP ELKSEIEALR 60 SKKESANIII SAAKNKNIIP TSKCQLIPAV LLNKINQEEA TVQISIARSE GEEYDQNGYL 120 TSLFTNLLQR LEDEGICVKN ASTLYVYESR LICYNLHIQI NNTTSGADFN IEELNTDKVI 180 SWLR* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.B00825.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012850147.1 | 1e-132 | PREDICTED: transcription factor bHLH101 | ||||
TrEMBL | A0A022QJ63 | 1e-110 | A0A022QJ63_ERYGU; Uncharacterized protein (Fragment) | ||||
STRING | Migut.B00825.1.p | 1e-131 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA15451 | 6 | 7 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71200.1 | 1e-19 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.B00825.1.p |