PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.B00480.1.p
Common NameLOC105957396, MIMGU_mgv1a022314mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family M-type_MADS
Protein Properties Length: 233aa    MW: 26395.8 Da    PI: 8.333
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.B00480.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF70.91.2e-221663249
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                      +ie k   qvtfskRr g++KKA+EL++LC++e+a+i+fs+ gk++ +
  Migut.B00480.1.p 16 KIEVKNHLQVTFSKRRSGLFKKASELCTLCGVEIAIIVFSPAGKVFSF 63
                      68889999*************************************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004323.7E-34766IPR002100Transcription factor, MADS-box
SuperFamilySSF554551.44E-27778IPR002100Transcription factor, MADS-box
PROSITE profilePS5006625.287767IPR002100Transcription factor, MADS-box
CDDcd002651.04E-34876No hitNo description
PRINTSPR004045.4E-19929IPR002100Transcription factor, MADS-box
PfamPF003191.3E-241663IPR002100Transcription factor, MADS-box
PRINTSPR004045.4E-192944IPR002100Transcription factor, MADS-box
PRINTSPR004045.4E-194465IPR002100Transcription factor, MADS-box
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009960Biological Processendosperm development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MAKKPSMGRQ KIKIEKIEVK NHLQVTFSKR RSGLFKKASE LCTLCGVEIA IIVFSPAGKV  60
FSFGHPNVES IVDRFLPRNS ACPNNNNNGP YHLIEAQRNA SVRDLNLQLG QVSYELDLER  120
KRAENLDNVR KTNETQYWWE GPVEKLGLDE LEQLKTAMED LKENVSQHVN KMMMNTIHSN  180
SIFNMSNNKG VFEQYESKPS QLAIHVAENN NNNNNVNNDH ANAGFGYCHG FF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.B00480.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012836772.11e-173PREDICTED: agamous-like MADS-box protein AGL62
TrEMBLA0A022RBA81e-172A0A022RBA8_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA20424223
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.12e-53AGAMOUS-like 62