PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Migut.B00361.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Family | bHLH | ||||||||
Protein Properties | Length: 199aa MW: 22127.3 Da PI: 8.3278 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 13.8 | 0.0001 | 8 | 24 | 39 | 55 |
TCHHHHHHHHHHHHHHH CS HLH 39 sKaeiLekAveYIksLq 55 +K++i+ +Av+YIk+Lq Migut.B00361.1.p 8 DKSTIVDEAVNYIKKLQ 24 7***************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:4.10.280.10 | 2.2E-5 | 6 | 42 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 8.18E-5 | 7 | 50 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:3.30.70.260 | 5.4E-4 | 123 | 177 | No hit | No description |
CDD | cd04873 | 2.41E-5 | 124 | 184 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence Send to blast |
NKILLQADKS TIVDEAVNYI KKLQETLEKL QKQKLDKLHN TNNQVITRIN YDPPSLITQQ 60 NFGIHQSREA FLAEMGSTSS TSAVTLASPP INQLFSGPEL SAIFKTWTSA NVVLNVCWKD 120 AHFSVCGSKK PGLFTAICFV MEKHKLDVVS AQVSSDRNRC MYMIHARANG GSDQFQQAFS 180 VEEIYKQAAA EIMLWVNS* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Migut.B00361.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012836734.1 | 1e-143 | PREDICTED: transcription factor bHLH95-like | ||||
TrEMBL | A0A022RBM8 | 1e-117 | A0A022RBM8_ERYGU; Uncharacterized protein (Fragment) | ||||
STRING | Migut.B00361.1.p | 1e-147 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1324 | 23 | 69 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49770.1 | 6e-17 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Migut.B00361.1.p |