PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.B00011.1.p

Common Name

MIMGU_mgv1a000964mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

Nin-like

Protein Properties

Length: 964aa MW: 106289 Da PI: 6.6589

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.B00011.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.7	5.6e-29	643	693	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isl++l++yF++++kdAAk++gvc+T+LKriCRq+GI RWP+Rkik++ Migut.B00011.1.p 643 EKSISLQVLRQYFAGSLKDAAKNIGVCPTTLKRICRQHGITRWPSRKIKKV 693 799**********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101447	3.92E-5	103	113	No hit	No description
PROSITE profile	PS51519	17.359	632	713	IPR003035	RWP-RK domain
Pfam	PF02042	2.0E-24	646	693	IPR003035	RWP-RK domain
Gene3D	G3DSA:3.10.20.240	5.9E-24	862	943	No hit	No description
SuperFamily	SSF54277	5.15E-23	863	949	No hit	No description
PROSITE profile	PS51745	23.546	864	947	IPR000270	PB1 domain
SMART	SM00666	1.2E-27	864	947	IPR000270	PB1 domain
Pfam	PF00564	3.5E-18	864	946	IPR000270	PB1 domain
CDD	cd06407	2.78E-41	865	946	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 964 aa Download sequence Send to blast
MEDDDGFTPN SSSMLGTSTV DFSLMDELLY DGFWLETTTD ESNFWRPFPT PTDLNSSSSF 60 SFPPSSDIHT NIPSFNSNPP HPTYLKESDN SNIFSLPSSL NYPPPPPPPP PPPQMDGSSQ 120 NNEPSVPLDQ STSYQVEDTQ VNNRRMWVRP ARNPIRTISV RKRLVQAINH LKDSIRDKDV 180 LIQIWVPVKN GGKQVLRTND QPFVLTANSK NLAEYRDVSL NYQFAADENS KELAGLPGRV 240 FLNKLPEWTP DVRFFKSEEY PRVNHAQQYN VRGSVALPVF EQGSGNCLGV VEIVTTSQRV 300 NYRPELENVC EALEAVDLKS SNIPIPPNVV EDGNESYQDV LIEIRNVLKC VCNTHKLPLA 360 QTWAPCTQQG KGGCRHSDEN YTHCVSTIDS ACYVANQQVS GFHEACSEHH LLKGEGIAGK 420 AFLTNEPCFS EDITAMSKTE YPLAHHARMF NMCAAVAIRL RSTYTGTADF VLELFLPLNC 480 RDAEGQRQML DSLSSVIQRT CQSLRVVTDQ ELARETSARE TGGTLAGGKR PKLVDPTSKE 540 ASPNPSSSTM QMKMNDSQQK GKGVAFTLGH HKEEPTEFNV STTQWDNSGS EFHQMPAFFG 600 DEQHQQDSGP KPSLESSGNF FFAGGDLSVG SKTSAEKRRT KTEKSISLQV LRQYFAGSLK 660 DAAKNIGVCP TTLKRICRQH GITRWPSRKI KKVGHSLKKL QLVIDSVQGA EGSIQLSSFY 720 NNFPELVSPN VPGSSHLSTS KMSGQVKTRA DGTLLSPTTT ASKSSSSSGS HSSSSSYCCS 780 TGVKQSSFPV NGSSSGDALS AEQTEGMMLK RARSDAGLHD LLGQEETKLL VRSCSHKFFS 840 NNASAEAPPV PEKSSKAPHD HVDTFRVKAA FGEEKIRFSL QPQWGFKDLQ QEVFRRFNID 900 NGGRVDLKYL DDDSEWVLLT CDADLEECID IHRSSKNKTI KLALNQAYHH PSLGSSLGSN 960 GPY*

Sequence ? help Back to Top

Protein Sequence Length: 964 aa Download sequence Send to blast

MEDDDGFTPN SSSMLGTSTV DFSLMDELLY DGFWLETTTD ESNFWRPFPT PTDLNSSSSF  60
SFPPSSDIHT NIPSFNSNPP HPTYLKESDN SNIFSLPSSL NYPPPPPPPP PPPQMDGSSQ  120
NNEPSVPLDQ STSYQVEDTQ VNNRRMWVRP ARNPIRTISV RKRLVQAINH LKDSIRDKDV  180
LIQIWVPVKN GGKQVLRTND QPFVLTANSK NLAEYRDVSL NYQFAADENS KELAGLPGRV  240
FLNKLPEWTP DVRFFKSEEY PRVNHAQQYN VRGSVALPVF EQGSGNCLGV VEIVTTSQRV  300
NYRPELENVC EALEAVDLKS SNIPIPPNVV EDGNESYQDV LIEIRNVLKC VCNTHKLPLA  360
QTWAPCTQQG KGGCRHSDEN YTHCVSTIDS ACYVANQQVS GFHEACSEHH LLKGEGIAGK  420
AFLTNEPCFS EDITAMSKTE YPLAHHARMF NMCAAVAIRL RSTYTGTADF VLELFLPLNC  480
RDAEGQRQML DSLSSVIQRT CQSLRVVTDQ ELARETSARE TGGTLAGGKR PKLVDPTSKE  540
ASPNPSSSTM QMKMNDSQQK GKGVAFTLGH HKEEPTEFNV STTQWDNSGS EFHQMPAFFG  600
DEQHQQDSGP KPSLESSGNF FFAGGDLSVG SKTSAEKRRT KTEKSISLQV LRQYFAGSLK  660
DAAKNIGVCP TTLKRICRQH GITRWPSRKI KKVGHSLKKL QLVIDSVQGA EGSIQLSSFY  720
NNFPELVSPN VPGSSHLSTS KMSGQVKTRA DGTLLSPTTT ASKSSSSSGS HSSSSSYCCS  780
TGVKQSSFPV NGSSSGDALS AEQTEGMMLK RARSDAGLHD LLGQEETKLL VRSCSHKFFS  840
NNASAEAPPV PEKSSKAPHD HVDTFRVKAA FGEEKIRFSL QPQWGFKDLQ QEVFRRFNID  900
NGGRVDLKYL DDDSEWVLLT CDADLEECID IHRSSKNKTI KLALNQAYHH PSLGSSLGSN  960
GPY*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.B00011.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012837255.1	0.0	PREDICTED: protein NLP2-like isoform X3
TrEMBL	A0A022RCG9	0.0	A0A022RCG9_ERYGU; Uncharacterized protein
STRING	Migut.B00011.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1598	24	67

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein

Link Out ? help Back to Top
Phytozome	Migut.B00011.1.p