PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.A01209.1.p
Common NameMIMGU_mgv1a023214mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 245aa    MW: 27050.5 Da    PI: 4.4137
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.A01209.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.56e-121155150
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaar 50
                      +++ GVr  k++ ++ AeI+d+++   +kr++lg+f t+eeA   +  ++
  Migut.A01209.1.p 11 TKFVGVR--KRNSKYSAEIWDFRK---KKRVWLGTFNTPEEASFVYLSMK 55
                      6899**7..5567********843...6**************87666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.99E-131151No hitNo description
PfamPF008472.0E-51147IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.8E-121265IPR001471AP2/ERF domain
SMARTSM003802.5E-51273IPR001471AP2/ERF domain
PROSITE profilePS5103210.9551271IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-101258IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MADLKKDERQ TKFVGVRKRN SKYSAEIWDF RKKKRVWLGT FNTPEEASFV YLSMKREIDE  60
YKAKLFAKKI PSQNPSSTLD SPSHVQLSDK NDVSDGTSSR SAAVLEEQDS EENEDSDETR  120
SRSAAPGEKE QVSGENEVSD GTRSAAAMEG QVSGKKEVSD ETSSRSAAAM EDQVSDKNQV  180
FDETRSHSAA AVEGKDEVCG YQDDKLGFIN GVQVFDEYGI LVGEFSHIDD LSIICQPEDC  240
ASIF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11634RKRNSKYSAEIWDFRKKKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.A01209.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012857142.11e-180PREDICTED: ethylene-responsive transcription factor TINY-like
TrEMBLA0A022PZR01e-178A0A022PZR0_ERYGU; Uncharacterized protein (Fragment)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33710.24e-11ERF family protein